Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1645 ATGGAACCTAGTTCAAGGTTTGTGGTCTTGTCCTTGCTTGTTCTAGTGACTATTACTACAACAAGCTCAGCACAGCTCACTCGTGGCTTCTACAACAACATATGCCCCAATGTTGAGCAGTTGGTTCGTTCTGCAGTGCAGCAGAAATTCCAACAGACCTTTGTCACTGCCCCTGCTACCCTCAGACTCTTCTTCCATGATTGCTTAGTTCGGGGCTGTGATGCATCTGTTTTGCTTTCATCACCAAACAATAACGCAGAGAAGGATCATCCTGATGATATATCACTTGCTGGTGACGGCTTCGACACGGTGGTTAAGGCCAAGGCAGCTGTTGATAGGGATGCTCGGTGCCGAAACAAAGTCTCTTGTGCTGACATACTCGCCCTGGCTACTAGGGATGTTGTGAACTTGGCAGGGGGGGCATTTTATAATGTTGAATTGGGAAGGCGTGATGGGAGAGTATCTACTAAAGCTAGTGTTCAACGCCAGCTTCCTGGTCCTGATTTCAATTTTAATCAGCTAAATGCTATCTTTAGCAAAATTGGCCTTTCCCAGAAAGATATGGTTGCATTATCAGGTGCACATACAATTGGATTCTCTCACTGCAGTCGCTTCTCAAAGAGAATCTACAGGTTCAGCCCCAGAAACACAGTTGACCCAACACTGAATTTACAGTATGCTTTCCAGCTTAGGCAGATGTGCCCTTTAAAAGTTGATCCAAGAATTGCCATAAACATGGACCCTGTCACGCCTCGAAAGTTTGACAATCAATACTACAAGAATCTGCAGCAAGGGAAGGGTCTCTTCACTTCTGATCAGGTTCTGTTTACAGATGCAAGGACAAAGCCCACGGTCAACTTGTTTGCATCAAGTGAACAAGCTTTTCAGAGTGCTTTTGCTGATGCTATGACTAAGTTGGGAAGGTTTGGTGTTAAAACTGGAAATCAAGGTGAAATTAGGATTGATTGCAGCAGGCCCAACTAG 984 0.4502 MEPSSRFVVLSLLVLVTITTTSSAQLTRGFYNNICPNVEQLVRSAVQQKFQQTFVTAPATLRLFFHDCLVRGCDASVLLSSPNNNAEKDHPDDISLAGDGFDTVVKAKAAVDRDARCRNKVSCADILALATRDVVNLAGGAFYNVELGRRDGRVSTKASVQRQLPGPDFNFNQLNAIFSKIGLSQKDMVALSGAHTIGFSHCSRFSKRIYRFSPRNTVDPTLNLQYAFQLRQMCPLKVDPRIAINMDPVTPRKFDNQYYKNLQQGKGLFTSDQVLFTDARTKPTVNLFASSEQAFQSAFADAMTKLGRFGVKTGNQGEIRIDCSRPN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1645 327 Gene3D Peroxidase, domain 2 165 306 - -
Lja4g1645 327 SUPERFAMILY Heme-dependent peroxidases 25 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PANTHER PEROXIDASE 16-RELATED 5 327 - -
Lja4g1645 327 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Lja4g1645 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lja4g1645 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Lja4g1645 327 PANTHER - 5 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 Gene3D - 29 327 - -
Lja4g1645 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1645 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1645 Lja-Chr4 15462621 15465124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1645 1 327 Peroxidase AT2G18980 69.419 2.35e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1645 K00430 - gmx:100804620 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0269 2 2488889 2491525 Lja4g1645 4 15462621 15465124 PCT