Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1639 ATGTCAGTAACCTTTAAAGGCTGTTACACCGTGAAGCCCATGGAACCAACATGGTGCGGTCGCTTAGCCTTATCTGAATGGGACCAAACTGGAATTATAACTCACGTGCCCACTATGTACTTCTACCGCCCCTCAGGTGACTCCTCCACCATCGCTGCCACCTTGAGAGACTCCTTAAGCCGAATCCTCGTGCCGTTTTATCCATTAGCCGGTCGTTTACAATGGACAGACGAAAACAACGGTCGTTTAGAGCTCGAGTGCAATGCCATGGGGGTTAAGTTCATCGAAGCAGAGTCCTCGCTAACATTAGACGACCTTGGTGACTTTTCACCTTGTTCAGAGTACCAACACCTCACCCCGAGTGTGGACTACACACTCCCAATTCACGAGTGGCCTTTGTTTCTAGTTCAGCTCACGAGGTTTGCATGTGGTGGCGTTTGTATCAGCCTCCAATTCTCACACGCGGTTGGGGATGGACCGAGCGCTCTTCACTTCATTTCAGAGTGGGCGAGGCTCACACGCGGCGAGCCTCTGCAAACGATGCCGTTTCTTGACCGGAAAGTGCTGCATGCGGGGGAGCCTCCGTTAATGAAAGCAAACCAGGGTGATAGGGGGTTCAAGCTCCCTAGTTTGCTTTTGGACAAAAAAGAAGAAAAACATAGGACAGAGAAGAAGAAGAAAAACTCTTTGGCTACCCTCAAAGTAAGCAAAAGCCAAGTTGAGAAATTGAGAAAGGAAGCAAACGCGAGTTTGGACGGTTCTAACAACGGTCGTGGTTACACGAGGTATGAGACTATAACTGGTCACATGTGGAGGAGTGCATGCAAAGCAAGGCGGCACATACATGACCAACCAACGCTGTTAGGTGTGAGTGTCGACGCGAGGCGTCGCATGCAACCTCCTCTACCAAAAGGGTATTTTGGGAACGCCTCTTTCGACGTGGTGGCTACCGGTGTTGCCGGTGATCTAGTGTCGAAGCCTTTGGGATATGCATCAGGGAGGATAAGGGAGGCGATTGAGAAGGTGAATGATGAGTACGTAAGGTCAGAGATTGAGTTCTTGAAAGGGCAGAGGGATTTGAAGAAGTTTCAAGATCTTCATGCCATTAGGAGTGAGGACGGGGATTTTTTTGGGGACCCAAACCTTTGTGTGGTTAGTTGGTTAGCGTTGCCGATCTATGGGGTTGATTTTGGGTGGGGAAAGGAGGTTTTCATGGGTCCAGGGACGCATGACTCTGATGGAGATTCTTTGCTTCTTCCTGGTCCAGATGGAGATGGATCTTTGCTCATTCCTATTTGTCTGCAAGAGATTCATATGGAGGCCTTTAAGAAGCATTTTTATGAAGGCATTATGTGA 1356 0.4904 MSVTFKGCYTVKPMEPTWCGRLALSEWDQTGIITHVPTMYFYRPSGDSSTIAATLRDSLSRILVPFYPLAGRLQWTDENNGRLELECNAMGVKFIEAESSLTLDDLGDFSPCSEYQHLTPSVDYTLPIHEWPLFLVQLTRFACGGVCISLQFSHAVGDGPSALHFISEWARLTRGEPLQTMPFLDRKVLHAGEPPLMKANQGDRGFKLPSLLLDKKEEKHRTEKKKKNSLATLKVSKSQVEKLRKEANASLDGSNNGRGYTRYETITGHMWRSACKARRHIHDQPTLLGVSVDARRRMQPPLPKGYFGNASFDVVATGVAGDLVSKPLGYASGRIREAIEKVNDEYVRSEIEFLKGQRDLKKFQDLHAIRSEDGDFFGDPNLCVVSWLALPIYGVDFGWGKEVFMGPGTHDSDGDSLLLPGPDGDGSLLIPICLQEIHMEAFKKHFYEGIM* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1639 451 SUPERFAMILY CoA-dependent acyltransferases 98 178 - -
Lja4g1639 451 Gene3D - 216 449 IPR023213 -
Lja4g1639 451 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 449 - -
Lja4g1639 451 Pfam Transferase family 1 448 - -
Lja4g1639 451 Gene3D - 1 203 IPR023213 -
Lja4g1639 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1639 Lja-Chr4 15412572 15413927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1639 1 448 Monolignol Biosynthesis Gene Families AT5G48930 38.444 4.84e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1639 K13065 - gmx:100777007 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1639 4 15412572 15413927 Lja4g1639 4 15412572 15413927 ECH