Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1632 ATGGCTTCCCAGGAGAAGAAGAAGCTGCAGAAAAGCTACTTCGATGTTTTGGGTTTGTGTTGTTCTTCTGAGGTGCCGCTTATTGAGGGCATCCTGAAACCTCTGGAAGGAATCAAAGAGGTTTCTGTCATCGTACCATCACGAACCGTCATCGTTGTTCATGACGGTCTCATCATTTCTCAGCTCCAGATTGTTAAGGCTCTGAATCAAGCAAGGCTAGAAGCGAATGCTAGAGTGTATGGGAATGAAAAGCACCAAAAGAGATGGCCAAGTCCATATTCAATTGCTTCTGGGTTGCTACTTTTGCTTTCGTTTCTCAAGTATGTTTATTCTCCACTGAAATTTCTGGCACTTGGAGCAGTTGCTGCGGGCATATTCCCAATTATCTTAAAATCTTTTGCTTCACTTCGGAACGCAAGACTTGACATCAACATTCTCATGATTATAGCAGTGATTGGCACAATTGCTATGAATGATTATTTGGAAGCCGCCACCATTGTTTTCCTATTCTCAATTGCAGAATGGCTAGAAACAAGGGCAAGCTACAAGGCAAATGCAGTAATGTCATCACTGATGAACATAACTCCTCAAAAAGCAGTCATAGCTGAAACAGGAGAAGTTGTGGATGCCGATGAAGTGAAAGTTAACACCATCATTGCAGTTAAAGCAGGGGAGGTGATACCCATTGATGGGGTTGTTTCAGATGGAAACTGTGAAGTTGATGAAAAACATTTGACTGGGGAATCATTCCCAGTAGCCAAGCAAAGGGATTCTACTGTCTGGGCTGGCACCATCAATTTAAATGGCTATATTAGTGTGAAAACCACTGCATTGGCTGAAGATTGTGTGGTTGCTAAAATGGCAAAGCTTGTGGAAGATGCTCAGAACAGTAAAACCAGCACTCAGAGATTGATTGACAAGTTTGCCAAGTTTTATACCCCAGCTGTGGTAGTCATATCAGCTCTTGTAGCTGTAATTCCATTAGTGTTTAAAGTGCATAATGAGAAGCACTGGCTTCATTTTGCACTAGTGATCTTAGTGAGTGCATGCCCATGTGCACTTGTACTTTCAACACCAGTTGCAACTTTTTGTGCCTACACTAAAGCAGCTACATCGGGTCTTCTCATCAAAGGGGGTGAAAATCTTGAGACACTTGCCAAAATTAAGACCATGGCTTTTGACAAAACTGGCACTATAACAAAGGGTGAATTTGTGGTGACAAGTTTTCAATCCCTTTCAGATGACATTGATTTGAGCACATTGCTTTACTGGGTGTCAAGCATTGAGAGCAAGTCAAGTCATCCATTGGCGGAAGCAATGGTTGATTATGGAAGGTCTCTCTCTATTGAACTAAAGCCAGAAAAGGTGACTGAATTTGAAAATTTTCCTGGAGAAGGAATCAGAGGGAAAATTGATGAGAGAGTTCTTTTCATTGGTAACAAAAAAATTGCCACAAGAGCAGGGTCTGAATCAGTTCCGACCTTACAAGGTGAAGATCAAAGAGGAAAGACCACTGGGTACATATACTCTGAAGGGAGCCCAGTTGGATTTTTTTCTCTATCCGATGCTTGCCGATCAGGGGTTCAGGAAGCAATAGCGCAGCTTAAGTCATTGGGAATCAAAACCGCTATGCTCACCGGGGATTGTCAATCAGCCGCAATGCAAGCACAGGAGCAGCTTGGAAATGCTCTGGATTTAGTCCATGCAGAACTTTTGCCAGAGGACAAGGTGAAAATCATCTCAGAGTTAAAAACTGAAGGCCCAACAGCCATGATTGGAGATGGTGTTAATGACGCGCCTGCATTGGCTACAGCTGATATAGGAATCTCAATGGGAATTTCAGGTTCTGCACTGGCAAGTGAGACAGGCAACATAATTCTCATGTCAAATGACATTAGGAAGGTACCAGAAGCCATTAAGCTTGCAAAAAAAGCTCGGAGGAAAGTGATCGAAAATATTATCTTGTCGGTCATTACTAAGGCTGCGATTGTTGGTTTGGCCATTGGTGGTCATCCAATTGTTTGGGCAGCAGTTCTTGCTGATGTTGGAACATGTCTCTTGGTCATCTTAAACAGCATGTTAATTCTGAAGAGAGGACATAAGCATGGAGGAAAATGTTGTAAAACTTCAACTCAGAAACATGTCCACAAAAATGGATGTGGTGGTGGCAATTCCCCTCATCATCACCATCATCACGGGCATAAGAACCATGATCACCAGCATAAACACCAACATCAGCATCAACATGAAAGCCATGATCATTGTTGCTCAGACAATGCAAAAAAGATATCTCAGCCTCAGAAGTGTGCCTCCAAGACATGCTCCCCTAAGAGTCCACCCTGCCCTTCAAATTCAAGTTTATGTGGAAGTGTTAAGCATCTTAATACCACGGAGGGTCATGATCAATGTAAGGGAAATGATGAATTCCAGGAATCAGATCACTGCCATCATGGAAGATGTGACAAGAGTCAAGATGGAGTCCATAAGCATGATACTGAAAGCAAGGCTTGTTTGGAGTCACACAATTTGATCCTAAATGCAGAAAGTTATGGTGCAGTTACAACAAACAAGCATAGTAGTTGTTCAGGACACAAGTCCCATGGGGAAAAACACTGCCACACCCAAAATGTTGACATGGTTACTCATGATAGTGCTTCAATTTGTTCTCTTAGCCATTTCAATGTCTCTTGTAAAAAAGAAAGCCAACAGTCTGCTCAACATTGTCACGTGAACCATCATTGTGAAAATCTGAAAGACCATGGCATTCAGCATAAAAAATCAGGTTGTGATTCTGATTCTGAGAAGCATGGGACTGGTGAAATATCCATTGACATCGCTGATGAGCCTGTTGCCTCCAAGCATGGTTGTTTAAGTTTGAAAGAGGAAATAAAAGCTTCTTCTTGTTGTGAAGACCGCTCGGCTACATGTCACAAATTGCTTGCTGAATTTGGCTGTGAGGGTTTAAGTGAGAGAGAAGTCAGTGCTTGTTGCAGAAATGAAGGCACTTCGAAAGAGTCCCCGGAATCCTCTATTGTGCAGCATGCTTGTATTAGTTTGGACAAGAGAGAAGTTGGTGGATGTTGCAAGAGCTACATGAAAGAATGCTGTGCCAAACATGGACATGGACACTCAGGGGCTGGTTTTGTAGGAGGCTTATCAGAAATTATTACAGAATAG 3177 0.4246 MASQEKKKLQKSYFDVLGLCCSSEVPLIEGILKPLEGIKEVSVIVPSRTVIVVHDGLIISQLQIVKALNQARLEANARVYGNEKHQKRWPSPYSIASGLLLLLSFLKYVYSPLKFLALGAVAAGIFPIILKSFASLRNARLDINILMIIAVIGTIAMNDYLEAATIVFLFSIAEWLETRASYKANAVMSSLMNITPQKAVIAETGEVVDADEVKVNTIIAVKAGEVIPIDGVVSDGNCEVDEKHLTGESFPVAKQRDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEDAQNSKTSTQRLIDKFAKFYTPAVVVISALVAVIPLVFKVHNEKHWLHFALVILVSACPCALVLSTPVATFCAYTKAATSGLLIKGGENLETLAKIKTMAFDKTGTITKGEFVVTSFQSLSDDIDLSTLLYWVSSIESKSSHPLAEAMVDYGRSLSIELKPEKVTEFENFPGEGIRGKIDERVLFIGNKKIATRAGSESVPTLQGEDQRGKTTGYIYSEGSPVGFFSLSDACRSGVQEAIAQLKSLGIKTAMLTGDCQSAAMQAQEQLGNALDLVHAELLPEDKVKIISELKTEGPTAMIGDGVNDAPALATADIGISMGISGSALASETGNIILMSNDIRKVPEAIKLAKKARRKVIENIILSVITKAAIVGLAIGGHPIVWAAVLADVGTCLLVILNSMLILKRGHKHGGKCCKTSTQKHVHKNGCGGGNSPHHHHHHGHKNHDHQHKHQHQHQHESHDHCCSDNAKKISQPQKCASKTCSPKSPPCPSNSSLCGSVKHLNTTEGHDQCKGNDEFQESDHCHHGRCDKSQDGVHKHDTESKACLESHNLILNAESYGAVTTNKHSSCSGHKSHGEKHCHTQNVDMVTHDSASICSLSHFNVSCKKESQQSAQHCHVNHHCENLKDHGIQHKKSGCDSDSEKHGTGEISIDIADEPVASKHGCLSLKEEIKASSCCEDRSATCHKLLAEFGCEGLSEREVSACCRNEGTSKESPESSIVQHACISLDKREVGGCCKSYMKECCAKHGHGHSGAGFVGGLSEIITE* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1632 1058 Gene3D - 383 643 IPR023214 -
Lja4g1632 1058 SFLD C1.7: P-type atpase like 375 644 - -
Lja4g1632 1058 MobiDBLite consensus disorder prediction 717 759 - -
Lja4g1632 1058 Gene3D - 403 524 IPR023299 GO:0000166
Lja4g1632 1058 SUPERFAMILY Calcium ATPase, transduction domain A 206 291 IPR008250 -
Lja4g1632 1058 MobiDBLite consensus disorder prediction 723 748 - -
Lja4g1632 1058 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 143 484 - -
Lja4g1632 1058 Gene3D - 180 295 - -
Lja4g1632 1058 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 143 694 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lja4g1632 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 715 - -
Lja4g1632 1058 Pfam E1-E2 ATPase 202 370 - -
Lja4g1632 1058 Gene3D - 5 79 - -
Lja4g1632 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 715 - -
Lja4g1632 1058 SFLD p-type atpase 375 644 IPR044492 -
Lja4g1632 1058 ProSiteProfiles Heavy-metal-associated domain profile. 11 77 IPR006121 GO:0046872
Lja4g1632 1058 SUPERFAMILY HAD-like 392 693 IPR036412 -
Lja4g1632 1058 SUPERFAMILY HMA, heavy metal-associated domain 8 75 IPR036163 GO:0046872
Lja4g1632 1058 PRINTS P-type cation-transporting ATPase superfamily signature 592 611 - -
Lja4g1632 1058 PRINTS P-type cation-transporting ATPase superfamily signature 241 255 - -
Lja4g1632 1058 PRINTS P-type cation-transporting ATPase superfamily signature 538 548 - -
Lja4g1632 1058 PRINTS P-type cation-transporting ATPase superfamily signature 392 406 - -
Lja4g1632 1058 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Lja4g1632 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 166 670 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja4g1632 1058 PRINTS Copper-transporting ATPase signature 183 201 - -
Lja4g1632 1058 PRINTS Copper-transporting ATPase signature 570 587 - -
Lja4g1632 1058 PRINTS Copper-transporting ATPase signature 627 641 - -
Lja4g1632 1058 PRINTS Copper-transporting ATPase signature 314 328 - -
Lja4g1632 1058 SUPERFAMILY Calcium ATPase, transmembrane domain M 143 386 IPR023298 -
Lja4g1632 1058 Pfam haloacid dehalogenase-like hydrolase 388 606 - -
Lja4g1632 1058 ProSitePatterns E1-E2 ATPases phosphorylation site. 394 400 IPR018303 -
Lja4g1632 1058 CDD P-type_ATPase_HM 93 694 - -
Lja4g1632 1058 ProSitePatterns Hypothetical cof family signature 2. 592 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1632 Lja-Chr4 15304883 15314491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1632 7 715 Primary Pumps ATPases AT4G30110 70.000 0.0 1042
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1632 K01534 - gmx:100817567 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1632 4 15304883 15314491 Lja4g1632 4 15304883 15314491 ECH