Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1631 ATGGCTTCCCAGAAACAGGAGGAGAAGAAGTTGCAGAAGAGCTACTTCGACGTGTTGGGTTTGTGCTGCTCTTCAGAGGTGCCGCTGATTGAGAGCATCCTGAAACCTCTCGAAGGAATCAATGAGGTTTCTGTCATTGTCCCTTCACGAACCCTCATTGTTGTCCATGATAGTCTCATCATTTCTCAGTTCCAGATTGTTAAGGTTCTGAATCAAGCAAGGCTAGAAGCAAATGTTAGAGTGTATGGAAATGAAAAGCACCAAAAGAGATGGCCAAGACCATATTCAATTGCTTCTGGATTGCTTCTTTTGCTTTCGTTTCTCAAGTATGTCTACTCTCCATTAAAATTCCTGGCGCTTGGAGCAGTTGCTGTGGGCATATACCCAATCATCTTGAAATCTTTTGCTTCTCTACGAAACGCAATACTTGACATCAACATTCTCATGATCATAGCAGTAATTGGGACAATTGCTATGAATGATTATTTGGAAGCCGCCACCATTGTTTTCCTATTCTCAATTGCAGAATGGCTAGAGACAAGGGCAAGCTACAAGGCAAATGCAGTAATGTCATCATTGATGAACATAACTCCTCAAAAAGCAGTGATAGCTGAAACAGGAGAAGTTGTGGATGCTGATGAGGTGAAATTTAACACCATCATTGCAGTTAAAGCAGGGGAGGTGATAGCCATTGATGGGGTTGTTTCAGATGGAAACTGTGAAGTTGATGAAAAAAATTTGACTGGGGAATCATTCCCAGTAGCCAAACAAAAGGATTCTACTGTCTGGGCTGGCACCATCAATTTAAATGGTTATATTAGTGTGAAAACTACTGCATTAGCAGAAGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTGGAAGATGCTCAGAACAGTAAAACCAGCACTCAAAGATTGATTGACAAATTTGCCAAGTTTTATACCCCAGCTGTTGTCGCCATATCAACTCTTGCGGCGGTGATTCCACTAGTGTTGAAAGTACATAATGAGAAGCACTGGCTTCACTTTGCACTGGTGATCTTAGTGAGTGCATGCCCATGTGCACTTGTCCTTTCAACACCAGTTGCAACGTTTTGTGCCTACACTAAAGCAGCTACATCCGGTCTTCTCATCAAAGGGGGTGAAAATCTTGAAACACTGGCAAAAATTAAGATCATGGCTTTTGACAAAACTGGCACTATAACAAAGGGTGAATTTGTGGTGACAAGTTTTCAATCCCTCTCAAAGGACATTGATTTGAGCACGTTGCTTTACTGGGTGTCAAGCATTGAGAGCAAGTCAAGCCATCCATTGGCTGAAGCAGTGGTTGATTATGGAAAGTCTTTCTCTATTGAACCAAAGCCAGAAAAGGTGACTGAATTTGAAAATTTTCCTGGAGAAGGAATCTGTGGGAAAATTGATGAGAGTGTTTTTTTCATTGGTAACAAAAAAATTGCCACAAGAGCAGGGTCTGAATCAGTTCCGACGTTACAAGGTGAAGATCAAAGAGGAAAGACCACCGGGTACATATACTCCGAAGGGAGCCCAGTTGGATATTTTTCTCTATCGGATGCTTGTCGATCAGGGGTTCAGGAAGCAATAGCGCAGCTTAAGTCATTGGGAATCAAAACCGCTATGCTCACCGGGGATTGTGAATCAGCCGCAATGCAAGCACAGGAGCAGCTTGGAAATGCTCTGGAGTTAGTCCATGCAGAACTTTTGCCAGAGGACAAGGTGAAAATCATCTCAGGGTTTAAAACTGAAGTCCCAACAGCCATGATTGGAGATGGTGTTAATGACGCACCTGCATTGGCTAAAGCTGATATAGGAATCTCAATGGGAATTTCAGGTTCTGCACTGGCAAGTGAGACAAGCAATATAATTCTCATGTCAAATGATATTAGGAAGGTGCCAGAAGCCATTAAGCTCGCGAGAAAATCTCGGAGGAAAGTGATAGAAAATATCATCTTGTCTGTCATTACGAAGGCTGCGATTGTCTGTTTGGCCATTGCTGGCCATCCAATTGTTTGGGCTGCAGTTCTTGTTGATGTTGGAACATGTCTCTTGGTTATCTTAAACAGCATGTTGATTCTGAAGAAAGGACACAAACATGGAGGAAAATGTTGTAGATCTTCAACTCATAAACATGTCCACAAAAAAGGATGTGGTGGTGGCAATTCCCCTCATCATCACCATCATCACGGGCATAAGCACAAACATCAACATCAGCATCTGCATCAACATGATAGCCATGAGCATTGTTGCTCAGACAAAGCAAAAAAGATATCTCAGCCTCAGAAGTGTGCCTCCAAGACATGCTCCTCTAATAGTCCACCCCGCCCTTCAAGTTTGAGTCTAGGCAGAAGTGTTAAGCATCTTAATATCTCAGAGGGTCATGTCCAATGTGCTGAAAATGATGAAAAAGAAATCCAACAGTCTGCTCAACATTGTCACTTGATCCATCATTGTGAAAATCTGAAAGACCATGGCATTCAGCATAAAAAATCAGGTTGTGATTCTGATTCTAAGAAGCACGGGTCAGGTGAAATATCCATTGACATCGATGGACATGTCCATTCAGCCTCCAAGCATGGCTGTTCAACTTTGAAAGAGGAAACAAAAGGTTCTTGTTGTGGAAACCGCTCGGACACATATCACAAATGGCCTACTGAAATTGGCTGTGACTGTGAGGGTTTAAATGAGAGAGAAGTGAGTGCTTGTTGCAGAAATGTGGGGTCTTTGAAAGAATCTTTGGAATCCTCTATTATGCAGCATGCTTGTATTAGTTTGAACAAGAGATAA 2802 0.4229 MASQKQEEKKLQKSYFDVLGLCCSSEVPLIESILKPLEGINEVSVIVPSRTLIVVHDSLIISQFQIVKVLNQARLEANVRVYGNEKHQKRWPRPYSIASGLLLLLSFLKYVYSPLKFLALGAVAVGIYPIILKSFASLRNAILDINILMIIAVIGTIAMNDYLEAATIVFLFSIAEWLETRASYKANAVMSSLMNITPQKAVIAETGEVVDADEVKFNTIIAVKAGEVIAIDGVVSDGNCEVDEKNLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEDAQNSKTSTQRLIDKFAKFYTPAVVAISTLAAVIPLVLKVHNEKHWLHFALVILVSACPCALVLSTPVATFCAYTKAATSGLLIKGGENLETLAKIKIMAFDKTGTITKGEFVVTSFQSLSKDIDLSTLLYWVSSIESKSSHPLAEAVVDYGKSFSIEPKPEKVTEFENFPGEGICGKIDESVFFIGNKKIATRAGSESVPTLQGEDQRGKTTGYIYSEGSPVGYFSLSDACRSGVQEAIAQLKSLGIKTAMLTGDCESAAMQAQEQLGNALELVHAELLPEDKVKIISGFKTEVPTAMIGDGVNDAPALAKADIGISMGISGSALASETSNIILMSNDIRKVPEAIKLARKSRRKVIENIILSVITKAAIVCLAIAGHPIVWAAVLVDVGTCLLVILNSMLILKKGHKHGGKCCRSSTHKHVHKKGCGGGNSPHHHHHHGHKHKHQHQHLHQHDSHEHCCSDKAKKISQPQKCASKTCSSNSPPRPSSLSLGRSVKHLNISEGHVQCAENDEKEIQQSAQHCHLIHHCENLKDHGIQHKKSGCDSDSKKHGSGEISIDIDGHVHSASKHGCSTLKEETKGSCCGNRSDTYHKWPTEIGCDCEGLNEREVSACCRNVGSLKESLESSIMQHACISLNKR* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1631 933 Gene3D - 182 297 - -
Lja4g1631 933 ProSitePatterns E1-E2 ATPases phosphorylation site. 396 402 IPR018303 -
Lja4g1631 933 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 696 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lja4g1631 933 SFLD C1.7: P-type atpase like 377 646 - -
Lja4g1631 933 CDD P-type_ATPase_HM 95 696 - -
Lja4g1631 933 MobiDBLite consensus disorder prediction 719 746 - -
Lja4g1631 933 MobiDBLite consensus disorder prediction 719 751 - -
Lja4g1631 933 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 388 IPR023298 -
Lja4g1631 933 SFLD p-type atpase 377 646 IPR044492 -
Lja4g1631 933 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 145 485 - -
Lja4g1631 933 Gene3D - 385 645 IPR023214 -
Lja4g1631 933 SUPERFAMILY Calcium ATPase, transduction domain A 208 293 IPR008250 -
Lja4g1631 933 Gene3D - 405 526 IPR023299 GO:0000166
Lja4g1631 933 Pfam haloacid dehalogenase-like hydrolase 390 608 - -
Lja4g1631 933 ProSiteProfiles Heavy-metal-associated domain profile. 13 79 IPR006121 GO:0046872
Lja4g1631 933 ProSitePatterns Hypothetical cof family signature 2. 594 616 - -
Lja4g1631 933 MobiDBLite consensus disorder prediction 767 787 - -
Lja4g1631 933 Gene3D - 8 81 - -
Lja4g1631 933 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 168 672 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja4g1631 933 PRINTS P-type cation-transporting ATPase superfamily signature 243 257 - -
Lja4g1631 933 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Lja4g1631 933 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Lja4g1631 933 PRINTS P-type cation-transporting ATPase superfamily signature 394 408 - -
Lja4g1631 933 PRINTS P-type cation-transporting ATPase superfamily signature 540 550 - -
Lja4g1631 933 SUPERFAMILY HMA, heavy metal-associated domain 10 78 IPR036163 GO:0046872
Lja4g1631 933 PRINTS H+-transporting ATPase (proton pump) signature 594 610 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja4g1631 933 PRINTS H+-transporting ATPase (proton pump) signature 626 651 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja4g1631 933 Pfam E1-E2 ATPase 204 372 - -
Lja4g1631 933 SUPERFAMILY HAD-like 394 695 IPR036412 -
Lja4g1631 933 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 724 - -
Lja4g1631 933 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1631 Lja-Chr4 15280241 15288777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1631 11 881 Primary Pumps ATPases AT2G19110 59.202 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1631 K01534 - gmx:100817567 1231.08