Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1626 ATGGAACGGTCAACGAAGATGAGATTGGTGGAGTTTGGTTGTGTTTTGATTGTTCTGTCTCTTCTTCTGGTTTCTGGGAGCGCTGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATCAGTTACCGTGGAGGAATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATTGACACCACAAGTGAATTGGTTACTTCTTATGCTCGTCATCTTGAAAAGAGACATGACATGATTCTGGGGATGCTGTTTGAGCAAGAGACATACAAGAAGCTCTACAGCTATAAACATCTTATAAATGGGTTTGCTGTTCATATTTCCCCAGAACAGGCAGAAACTCTAAGACGTGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGAAAACTGACGACACATACCCCGCAATTTTTAGGCCTTCCAACCGGGGTATGGCCGACAGGAGGCGGCTTTGATCGGGCTGGAGAAGACATTGTGATAGGATTTGTGGACTCAGGGATCTATCCCCACCACCCCAGCTTTGCGACTCATAATACCGAACCGTATGAGCCGGTTTTGAAGTATAGAGGAAAATGCGAAGTTGATCCGGATACTAAAAGAAATTACTGTAATGGGAAGATTGTCGGAGCACAACACTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTTGCATCTCCTTTGGATGGGGATGGACACGGAAGTCACACAGCCTCTATTGCAGCTGGAAATAATGGAATCCCTGTAAGATTTCATGGCCATGAATTTGGGAAAGCAAGTGGGATGGCTCCTCGTGCCAGGATTGCTGTGTACAAGGCCCTCTATAGACTGTTTGGAGGGTTTATTGCCGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACAGTCCTCCAACAGCCACAAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGCGGTCCATTTCCTAAGACAATGGTTTCATATAGTCCATGGATAACATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATTTGACCCTTGGGAATGGAAAAATCTTAGCTGGAATCGGGTTATCACCTTCTACACATTTAAACCAAACATACAAGTTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCACTTATTAAGTACAGCCCCACAGATTGCCAGAGACCAGAAGTTTTAAACAAGAAATTGATAGAGGGAAATATTCTTCTCTGTGGATATTCTTTCAACTTTGTTGTTGGTACTGCATCAATCAAGAAAGTCTCAGAAACAGCAAAGACCCTTGGGGCTGCTGGATTTGTTCTCTGTGTTGAAAACGTTTCCCCGGGAACTAAATTTGATCCTGTTCCTGTTGGCCTTCCCGGAATTCTTATCATAGATGTCAGCAATTCGCAGGAACTTGTAGATTATTATAATATCTCTACACCAAGAGACTGGACTGGACGGGTGAAGAGTTTCATAGGTACAGGTAAAATTGGCGACGGCTTGATGCCTATCCTTCATAAATCTGCACCACAGGTGGCATTGTTCTCCGCTAGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCCGATATATTAGCTCCTGGTTCATTGATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGTTTTGCCATGATATCTGGAACTAGCATGTCCGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACAATGGAGCCCTGCCGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCTCTTCTAGCCCAGCAAACTTCTGAAACAGAAGCTATGAAGCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGGCATGTTGATCCAAGAGCTGCCTTGGATCCTGGTCTCATCTTTGATGCAGGATACGAGGATTATCTCGGCTTCTTATGCACAACACCAGGCATTGACGTTCATGAGATAAAGAACTACACTCATGTGCCATGCAACACTACCATGGGTAAACCATCAAATTTAAACACCCCTTCTATCACAATTTCCCATCTTGCGGAACCTCAAGTTGTCACCCGCACGGTCACGAATGTTGCTGAGGAAGAAACCTACGTGATCACAGCCAGAATGGAACCAGCTGTTGCCATTGAAGTCAACCCTCCTGCAATGACTATCAGAGCAGGTGCATCGCGTAAGTTTTCTGTGACACTCACGGCTCGATCAGTTACAGGAAGCTATAGTTTTGGCGAGGTTGTAATGAAAGGGAGTAGAGGGCATAAGGTGAGGATACCTGTTGTGGCCAAAGGATGCCCCCGGTAG 2472 0.4474 MERSTKMRLVEFGCVLIVLSLLLVSGSAEVYIVTVEGEPIISYRGGIDGFEATAVESDEKIDTTSELVTSYARHLEKRHDMILGMLFEQETYKKLYSYKHLINGFAVHISPEQAETLRRAPGVKSVERDWKVRKLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNTEPYEPVLKYRGKCEVDPDTKRNYCNGKIVGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRFHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVYDGVDILSLSVGPNSPPTATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWITSVAAAIDDRRYKNHLTLGNGKILAGIGLSPSTHLNQTYKLVAANDVLLDSSLIKYSPTDCQRPEVLNKKLIEGNILLCGYSFNFVVGTASIKKVSETAKTLGAAGFVLCVENVSPGTKFDPVPVGLPGILIIDVSNSQELVDYYNISTPRDWTGRVKSFIGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYVGEGFAMISGTSMSAPHIAGIAALIKQKHPQWSPAAIKSALMTTSTTLDRAGNPLLAQQTSETEAMKLVKATPFDYGSGHVDPRAALDPGLIFDAGYEDYLGFLCTTPGIDVHEIKNYTHVPCNTTMGKPSNLNTPSITISHLAEPQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIRAGASRKFSVTLTARSVTGSYSFGEVVMKGSRGHKVRIPVVAKGCPR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1626 823 CDD Peptidases_S8_3 136 639 IPR034197 -
Lja4g1626 823 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 165 176 IPR023827 -
Lja4g1626 823 Gene3D - 697 820 - -
Lja4g1626 823 SUPERFAMILY Protease propeptides/inhibitors 92 133 - -
Lja4g1626 823 Pfam Peptidase inhibitor I9 30 133 IPR010259 -
Lja4g1626 823 Gene3D Peptidase S8/S53 domain 162 693 IPR036852 GO:0004252|GO:0006508
Lja4g1626 823 Gene3D - 375 540 - -
Lja4g1626 823 ProSiteProfiles Serine proteases, subtilase domain profile. 129 680 - -
Lja4g1626 823 PANTHER CUCUMISIN-RELATED 20 821 - -
Lja4g1626 823 ProSitePatterns Serine proteases, subtilase family, serine active site. 603 613 IPR023828 -
Lja4g1626 823 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 821 IPR045051 -
Lja4g1626 823 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 135 IPR037045 -
Lja4g1626 823 PRINTS Subtilisin serine protease family (S8) signature 602 618 IPR015500 -
Lja4g1626 823 PRINTS Subtilisin serine protease family (S8) signature 239 252 IPR015500 -
Lja4g1626 823 PRINTS Subtilisin serine protease family (S8) signature 160 179 IPR015500 -
Lja4g1626 823 SUPERFAMILY Subtilisin-like 135 684 IPR036852 GO:0004252|GO:0006508
Lja4g1626 823 Pfam Subtilase family 160 644 IPR000209 GO:0006508|GO:0008236
Lja4g1626 823 Pfam Fibronectin type-III domain 725 817 IPR041469 -
Lja4g1626 823 CDD PA_subtilisin_like 382 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1626 Lja-Chr4 15222775 15228914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1626 10 823 Subtilisin-like Serine Gene Family AT4G30020 81.005 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1626 - - gmx:100787619 1470.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1626 4 15222775 15228914 Lja4g1626 4 15222775 15228914 ECH
Lja4g1626 4 15222775 15228914 Lja6g2103 6 49625365 49632610 PCT