Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1575 ATGGGAATGGGAGTGGTTTTGGATCTGATGTTACAGCTCTGCATCATTGCCTTTGCTGTGGCAGCTCAAGGATCCAAAGGTTCCATCTTATCTCCATCTCCACTATTCCTTCCTGCCATTCCTCCTATAACAGAAACACTTGGTCCTATCAATCATGGAGAGTCTAAGGGAGGCAATGCACCAAGCTTACCACCAGAACCAGATGGGCTTGTTATGTCCCCAACTCCAGCAAACTTGCATACATATCCTTCCCCTATTGAATCACCTGGTTCTTTACCCCGAAGAGATTCATCGAGAAACATTGCTCCAAGCTTTCCACCAGTACCAAATGGGTCATTTTCTCACCCTCCAAATATAAGACCACTCCCTTCATCAGCTCCAACTCCTCAGATGCATAAAGACATTGAACCGTTCATATCTCCAAGTTCAAGCCCAGCAGCATTATCACCACCACATGATGTCATTCCTTCACCATCAACAGCGCAAGGAAATATGCCACCATCTGTAAAATCAAGTCCACCTCCAAGGAAAGCACCTTTTGTTAGGCCTCCTGCCCCTACACCAACTGCTCCAGCTCCAGTTGCAATACCTTCTGGCAGATCACCAGAAAATTCCCCAGTTAGCCAACCAGGTGAACATGGAAATTTGGCACCTAATGTTGATGATAGCAGAGCAAATAAGAGTCATACTGCAGAGCCAATTTCCCCAACACCAATTGTAACACCTTCTACCAATGTTCCCAAAAATTCACCACGCAGCCAACCGACTGAACATCAAAGTTATCCTCCTCAGCAGGGAACAAATAAGGGCCACGGCCCAGGACCAATTTCACCAGCCCCTTTTGCAGTTAATTTACCAAAAACATTGCCTGTCAGCCATCCGCCTGAACATGGGAGTTTACCGCCAAATGCTCATCAAAGGAATGCAAATACTGGTCACACCTTGGAGCCCATTTCTCCAGTTTCAGCAGCAAAACCTCCTGCAACTTTGAAAGAAAATTCACCAGTCAGTCAACCAACTCAACATGGAAGTATTCCACCAAATGTTAAGAGGAGTACGGATGAAGGTCACACTCCTGAGCCAGTTTCACCAAAGTCTGTTGCATCCCCACCATGGGAAATAGAACACATCCCACCAGTGACCCACCCTATTTTCCCAATAACAACTCCATCCATATTACCTGCACCAGCCACATCACCAATTAGTGCATTTCCAGTAAATAAACCATTGGTCCATCCAAATTTTCCAGTAGTGTCTCCATCAAAATTACCAGCATCTGTTCCCTCTCCCACGTCAACACCTTCAAGAAGCACCAATTGGAGAAAGGATGGAGAACCAGCTGCTGAACCTTTGTACAAAACACCAAAGCCACTTACAGATGTAATCCATTCCCCTGCTCGAGATAGAGCAATTCCTCCCTCATTGTCGTCAGCAAGTGGGAAAAAACATCATGTTCCACTACCAATGAACCCAGTATCTCCGTCGAAGTCTTTTATCAAGAGCCCTAAGATGCTCCTCCTGCCTCAGATTCATGCACTGCCACCCCCACCTCCAAATGAAGATTGTTTATCAACTGTCTGCGCAGAGCCTTATGTAACTTCGCCACCAGGAGCACCATGCAGATGTGTCTCGCCCATGAGAGTTGGTCTTCGCCTTAGTGTTCCTCTTTATACCTTCTTCCCTTTGGTTTCAGAGCTGGCTTCTGAAATTGCCACTGGCGTTTTCATGAAACAAAGTCAAATTCGAATTATGGGAGCCAATGAAGCAAACCAGGAACCTGAGAAAACTGTTGTCCTTATTGATTTGGTGCCACTTGGGGAAAATTTTGATAATACAACAGCCTTTCTGACTTTTGACAGATTTTGGCATAAAAAGGTAGTTATAAAGGCTTACTACTTTGGCGACTATGATGTGTTATATGTGAGCTATCCAGGTTTACCTCTTTCTCCTCCTTTACCACCTTCAAGCATTCCCTTCATATATGGTGACCCATATTCCACTGTTGGCAATAATGGAGGGGCAATAAAGCCCCTTGGGGTTGACATACATAAGAGTCAGCATAAAGGTGGACTTAGCAGAGGCATAATTGCCATTGTTGCTGTTTCAGTTTTTCTAGCAGCTGTTTTATGTACAGCTGTTGCTTGGGTCATGTTCAAATTTAGAGATCATGTTAGTCAACTAGCCTCAACCCCAAGGCTTTCACCACCTTCTCTTACCAAAACACCAGGTTCTGCTCGTGTGTCATTAATTGGAAATGTAGGGGCTGGTTCTAATTCCTCATCATTTCGATCTAGCATTGCTGCTTATACAGGGTCTTCTAAGACTTTCTCCATGAATGACCTTGAGAAAGCTACTGATAATTTTCATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGCCGTGTTTACGGTGGTGTCCTCGGAGAAGGAACAAAAGTGGCTGTCAAGGTTCTAATGAGGGATGATCATCATGGTGACCGTGAATTCTTAGCTGAGGTTGAGATGCTTAGTCGTCTTCACCATAGAAATTTGGTCAAGTTAATTGGTATATGTGCTGAGGACAGCTTCCGAGGCTTAGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGGGTTGACAAGGAAAACTGCACACTTGATTGGGGTGCTCGGATGAAGATAGCTCTTGGTGCAGCTCGCGGTCTAGCTTATCTGCATGAAGATTCAAGTCCCAGCGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCAAAAGTGGCTGATTTTGGATTGGCTAGGGCAGCAACGGATGGGCAGAACATACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTGTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACGGGAAGAAAACCTGTAGACATGTCACAAGCTCCTGGTCAAGAGAATCTTGTTGCGTGGGCTCGTCCACTTCTCGCTAGTAATGAAGGTCTGAAAGCAATAATAGATCCATCTGTGGGAGCTGATGTGCCTTTTGATATTGTAGCTAAAGTTGCAGCCATTGCATCAATGTGTGTGCAACCAGAGGTATCAAACCGTCCCTTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTATGCAGTGAATGTGAAGAAGCAAAAGAAGATGCAGTCTCAAGAAGTTCTAGCCAGGAAGATTTATCTGTTGTTTTAGATGGGGGAGCCAGCACTGTTTCTGGACAACTACAAGATGAAAGACATTTCTCGGCTAGTCACTTTAATTCTGAAGTTGATATTGAAAGATGCTTGTCAGCATCAGAACAATTCAGTTCATCCGCAAGAGTCGGCAGGCGAGATACTGAATCATTTAGAAGAAACTCTTATTCAGAACCTCTGAGATCCGAAAGAAGCACGCGGTTGTGGAAGATAATTAGAAGGCTTTCTGGTGGTAGTGCCAGTGAACATGGAACTATGTTCAAGTTATGA 3540 0.4441 MGMGVVLDLMLQLCIIAFAVAAQGSKGSILSPSPLFLPAIPPITETLGPINHGESKGGNAPSLPPEPDGLVMSPTPANLHTYPSPIESPGSLPRRDSSRNIAPSFPPVPNGSFSHPPNIRPLPSSAPTPQMHKDIEPFISPSSSPAALSPPHDVIPSPSTAQGNMPPSVKSSPPPRKAPFVRPPAPTPTAPAPVAIPSGRSPENSPVSQPGEHGNLAPNVDDSRANKSHTAEPISPTPIVTPSTNVPKNSPRSQPTEHQSYPPQQGTNKGHGPGPISPAPFAVNLPKTLPVSHPPEHGSLPPNAHQRNANTGHTLEPISPVSAAKPPATLKENSPVSQPTQHGSIPPNVKRSTDEGHTPEPVSPKSVASPPWEIEHIPPVTHPIFPITTPSILPAPATSPISAFPVNKPLVHPNFPVVSPSKLPASVPSPTSTPSRSTNWRKDGEPAAEPLYKTPKPLTDVIHSPARDRAIPPSLSSASGKKHHVPLPMNPVSPSKSFIKSPKMLLLPQIHALPPPPPNEDCLSTVCAEPYVTSPPGAPCRCVSPMRVGLRLSVPLYTFFPLVSELASEIATGVFMKQSQIRIMGANEANQEPEKTVVLIDLVPLGENFDNTTAFLTFDRFWHKKVVIKAYYFGDYDVLYVSYPGLPLSPPLPPSSIPFIYGDPYSTVGNNGGAIKPLGVDIHKSQHKGGLSRGIIAIVAVSVFLAAVLCTAVAWVMFKFRDHVSQLASTPRLSPPSLTKTPGSARVSLIGNVGAGSNSSSFRSSIAAYTGSSKTFSMNDLEKATDNFHASRILGEGGFGRVYGGVLGEGTKVAVKVLMRDDHHGDREFLAEVEMLSRLHHRNLVKLIGICAEDSFRGLVYELIPNGSVESHLHGVDKENCTLDWGARMKIALGAARGLAYLHEDSSPSVIHRDFKSSNILLEDDFTPKVADFGLARAATDGQNIHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLASNEGLKAIIDPSVGADVPFDIVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCSECEEAKEDAVSRSSSQEDLSVVLDGGASTVSGQLQDERHFSASHFNSEVDIERCLSASEQFSSSARVGRRDTESFRRNSYSEPLRSERSTRLWKIIRRLSGGSASEHGTMFKL* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1575 1179 SUPERFAMILY Protein kinase-like (PK-like) 767 1061 IPR011009 -
Lja4g1575 1179 Gene3D Phosphorylase Kinase; domain 1 760 863 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 221 271 - -
Lja4g1575 1179 CDD STKc_IRAK 794 1062 - -
Lja4g1575 1179 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 294 1179 - -
Lja4g1575 1179 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 69 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 77 373 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 424 440 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 77 107 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 422 457 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 331 348 - -
Lja4g1575 1179 Gene3D Transferase(Phosphotransferase) domain 1 864 1087 - -
Lja4g1575 1179 PANTHER OS01G0750732 PROTEIN 294 1179 - -
Lja4g1575 1179 PANTHER OS01G0750732 PROTEIN 9 69 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 303 317 - -
Lja4g1575 1179 MobiDBLite consensus disorder prediction 109 124 - -
Lja4g1575 1179 ProSitePatterns Protein kinases ATP-binding region signature. 794 816 IPR017441 GO:0005524
Lja4g1575 1179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672|GO:0006468
Lja4g1575 1179 MobiDBLite consensus disorder prediction 168 195 - -
Lja4g1575 1179 ProSiteProfiles Protein kinase domain profile. 788 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1575 1179 Pfam Protein tyrosine and serine/threonine kinase 790 1061 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1575 Lja-Chr4 14748160 14757585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1575 519 1175 Receptor kinase-like Gene Family AT5G56890 62.538 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lja4g1575 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1575 - - lja:Lj4g3v2141380.2 1752.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1575 4 14748160 14757585 Lja4g1575 4 14748160 14757585 ECH