Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1556 ATGAAGAGTTCATGTAGCAAAAGCAGTTATTACTACTTTTGGTTTTGGCTAATCAATATGCTCCTGTTGCATTTGGCAGTAAGGTCCCAACTCACCACAGATTTTTATAACTCCTCATGTCCTAGCCTTCTCAAAATAGTAAGAAGAGAAGTTAAAAAAGCTCTAATGAATGAAATGCGAATGGGTGGTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCAATATTACTAGATGGTGGTGATGATGTTGAAAAGTCTGCTCTTCCCAACTTGAACTCTGTTAGGGGATTTGATGTCATAGATACAATCAAAAGTTCAGTGGAGAGTGCTTGTAATGGGGTTGTGTCCTGTGCTGATATAGTAGCCATAGCTGCCAGAGACTCTGTTCTGCTAAGTGGTGGTCCTTCATGGAGTGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAATGGATCATTGGCAAATCAAGTGCTTCCTTCTCCATTTGATCCATTGGATTCAATCGTTACAAAATTTGCTAATGTAGGCCTCAATCTCACAGATGTTGTTTCTTTATCAGGTGCTCATACAATTGGCCGATCAAGGTGTGTATTTTTCAGCAACAGATTGTCCAACTTCTCAGGAACAGGTGCACCAGACAGTACCTTAGACTCAACCATGCTCACCGATCTGCAAAATTTATGTCCTCAAAATGGAGATGGAAACACAACCGCGGTCCTCGATCGGAACTCGTCGGATCTATTCGACAACCACTACTTCAAGAACTTGCTCAGCGGAAAGGGCATTCTCAGTTCTGATCAGATTCTGTTTTCTAGTGATGCCGCTAATTCAACTACCAAACCTTTAGTTCAAAGCTATAGCAACAATGCTGCACTTTTCTTTGTAGACTTTGTCAATTCTATGATCAAGATGGGGAATATTAATCCAAAGACTGGGTCTGATGGAGAGATTAGGAAGAATTGCAGGGTGATAAATTCTTAG 1002 0.4102 MKSSCSKSSYYYFWFWLINMLLLHLAVRSQLTTDFYNSSCPSLLKIVRREVKKALMNEMRMGGSLLRLHFHDCFVNGCDGSILLDGGDDVEKSALPNLNSVRGFDVIDTIKSSVESACNGVVSCADIVAIAARDSVLLSGGPSWSVLLGRRDGTVSNGSLANQVLPSPFDPLDSIVTKFANVGLNLTDVVSLSGAHTIGRSRCVFFSNRLSNFSGTGAPDSTLDSTMLTDLQNLCPQNGDGNTTAVLDRNSSDLFDNHYFKNLLSGKGILSSDQILFSSDAANSTTKPLVQSYSNNAALFFVDFVNSMIKMGNINPKTGSDGEIRKNCRVINS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1556 333 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Lja4g1556 333 PANTHER PEROXIDASE 72-RELATED 13 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 Pfam Peroxidase 47 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 ProSiteProfiles Plant heme peroxidase family profile. 30 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 CDD secretory_peroxidase 30 331 IPR033905 GO:0004601|GO:0042744
Lja4g1556 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Lja4g1556 333 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 Gene3D - 35 332 - -
Lja4g1556 333 Gene3D Peroxidase, domain 2 166 311 - -
Lja4g1556 333 SUPERFAMILY Heme-dependent peroxidases 30 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g1556 333 PANTHER PEROXIDASE 59 13 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1556 Lja-Chr4 14545861 14548513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1556 12 332 Peroxidase AT5G19890 60.748 1.39e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1556 K00430 - gmx:100814964 552.747