Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1534 ATGCTCACGTGCATAGCGCGTCCAAAGAAACCCGGGAACGAACCCGAAGATTCCGATCCAAACAACGCCGCGAAAAATCAAGCCGTGAAATCCCTAACTTCTCAGATTAAGGATATGGCGTTGAAGGCTTCAGGAGCGTACAAGCATTGCGCCCCCTGCACGGGGCCGGCGACGCAGGGTCGGGTTGAATCCGACGCGGACTCAGACCGGTTCCGGTGGTCTTACCGGAGAACAGGGAGTTCGAGCTCGACGACGACGACGAGGGGGGCGTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCAAGCGGGGAGGGGACGCCGAATTCCGCCAGCGGGCGGCGGACGGAGCCGGTGGCGGTGCTGTTCGTGGAGGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCGGGAGTTCTGATCACGTTTGTCTCATTGCCGCGTGGCGGGAACGATCTGAAGCGTATACGGTTCAGTCGAGAGATGTTCAACAAATGGCAAGCTCAGAAGTGGTGGGCTGAGAACTATGACAAGGTTATGGAACTTTACAATGTTCAAAGGTTAAGCCGGCAAGCGTTCCCTCTTCCAACGCCACCAAGGTCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGACAGCCCTGTAACACCACCACTAACCAAGGAACGGCTACCTCGTACTATTCACCGTCCAACCGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCAACATTCAATGCAGTCCCGGCATTTCTATGACGTGAACTCAACCCCAAAAGTCTCCACCATTAGTGCGGCCAAGACGGAGATATCATCAATAATGGATGCTTCTACTATAAGAAGTAGCTCATCCAGAGATGCTGATCGCTCAGCAGATTTATCAATCAGCAATGCTAGTGACTTGGAGACTGAATGGGTTGAGCAGGATGAGCCTGGTGTTTACATCACCATCAGAGCATTGCCAGGTGGTAAGAGGGAGCTCAGACGAGTCCGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGAGTATGGTGGGAGGAGAACCGCGCCAGAATACATGAACAATACTTGTGA 1095 0.537 MLTCIARPKKPGNEPEDSDPNNAAKNQAVKSLTSQIKDMALKASGAYKHCAPCTGPATQGRVESDADSDRFRWSYRRTGSSSSTTTTRGAWGKEMEARLKGISSGEGTPNSASGRRTEPVAVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQKWWAENYDKVMELYNVQRLSRQAFPLPTPPRSEDESSKLESAEDSPVTPPLTKERLPRTIHRPTGMGMGYSSSDSFDQHSMQSRHFYDVNSTPKVSTISAAKTEISSIMDASTIRSSSSRDADRSADLSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARVWWEENRARIHEQYL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1534 364 MobiDBLite consensus disorder prediction 194 224 - -
Lja4g1534 364 Pfam Transcription factor BRX N-terminal domain 18 53 IPR027988 -
Lja4g1534 364 ProSiteProfiles BRX domain profile. 309 364 IPR013591 -
Lja4g1534 364 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 364 - -
Lja4g1534 364 MobiDBLite consensus disorder prediction 1 27 - -
Lja4g1534 364 Pfam Transcription factor regulating root and shoot growth via Pin3 308 363 IPR013591 -
Lja4g1534 364 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Lja4g1534 364 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Lja4g1534 364 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 364 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1534 Lja-Chr4 14297565 14303496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1534 1 364 Major Intrinsic Protein MIP AT1G31880 45.128 9.76e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1534 - - gmx:100794109 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1534 4 14297565 14303496 Lja4g1534 4 14297565 14303496 ECH
Lja4g1534 4 14297565 14303496 Lja6g2024 6 48312812 48317531 PCT