Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1509 ATGGGTCTATTTACAAAAGTTTTTCTTTTACTATGCATGTTCGTGTTGACATCCGCCAGAACCGATTTTCATTTTTTTCCGAAATCACATGTGACAGTCATAAATTCTTTGAAGGGGAACTTGGACCTAACCATTCACATCAAGTCTGCAGATGATGATCTTGGAAGGCGCATTCTGCCTCCTGGTCACTCATTTGATTGGGGTTTTAGTCCTGGTCTTTTTACCAATACACAATTTTATGGTACATTTCAGTGGCAAAATGTCATTGAATGGTTCGATATATACATAGAAACAAGGGATGATGGAAAGTGTACTAATTGTGTTTGGTTTATAAAGCAAGAAGGACCATGTTTGAAGGCATACAACGGTAAATTGTCATGTTTTCCATGGAATAAAAATTAG 402 0.3682 MGLFTKVFLLLCMFVLTSARTDFHFFPKSHVTVINSLKGNLDLTIHIKSADDDLGRRILPPGHSFDWGFSPGLFTNTQFYGTFQWQNVIEWFDIYIETRDDGKCTNCVWFIKQEGPCLKAYNGKLSCFPWNKN* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1509 133 Pfam Plant self-incompatibility protein S1 30 130 IPR010264 -
Lja4g1509 133 PANTHER - 10 121 IPR010264 -
Lja4g1509 133 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 10 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1509 Lja-Chr4 13968684 13969085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1509 27 131 Carbohydrate Esterase AT3G16970 36.937 1.06e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1509 - - lja:Lj3g3v2995840.1 185.267