Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1505 ATGGCGATTTCAGGTTCAGACTCTCACTCTCAGTCTCAGTCTCAGTCTCCATCCTCTGCTGCTGTCACCAAACCAGTCTCTCAGGTGCCTGTGGTGGTCGAGGTTGAGTCTGTCCAATGCGACTCATGCGGCTTCACTGAGGAATGCACCCCTGCATACATCTCCCTCCTCCGCCACCGATTCCATGGCCACTGGCTCTGCGGCCTCTGTGCCGAGGCTGTCAAGGACGAGGTCACGCGATCGCAGAAGCTGATCACCATGGAGGAAGCCGTGGAGCGCCACATCAGTTTCTGCAGGGAGTTCCGATCATCCTCATTGTCTCCCAAAACAGAGCACCCGATTTTTGTCATGGGAAGGATCCTTCGCCGGAGTTTGGACTCGCCGCGGCATCTCCGATCAAGCTCGAGTGGAGCGCTCAATGTTGGTAGGGTTCGTGGTTCGTCTCTGCTCCGATCAGAGAGTTGCTTCCCATCCATTGGTTAA 483 0.5611 MAISGSDSHSQSQSQSPSSAAVTKPVSQVPVVVEVESVQCDSCGFTEECTPAYISLLRHRFHGHWLCGLCAEAVKDEVTRSQKLITMEEAVERHISFCREFRSSSLSPKTEHPIFVMGRILRRSLDSPRHLRSSSSGALNVGRVRGSSLLRSESCFPSIG* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1505 160 Pfam Protein of unknown function (DUF1677) 35 123 IPR012876 -
Lja4g1505 160 PANTHER OS01G0745000 PROTEIN 23 159 IPR012876 -
Lja4g1505 160 MobiDBLite consensus disorder prediction 1 22 - -
Lja4g1505 160 PANTHER DUF1677 FAMILY PROTEIN 23 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1505 Lja-Chr4 13904044 13904526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1505 - - gmx:100800301 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1505 4 13904044 13904526 Lja1g3990 1 50654205 50655104 ECH
Lja4g1505 4 13904044 13904526 Lja5g2946 5 57955055 57955474 ECH
Lja4g1505 4 13904044 13904526 Lja4g1505 4 13904044 13904526 ECH