Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1486 ATGCCAAAACATAACCCTCTCTCCCTTGCACTCTTTGCTAATTTCTTCCTCTTGTTCGCCGTTGCTGCTACAACGGCGGCAACAACCCCGCAAGATGAGGTGTTCCGCTCATCTTGCGCGGAGGCCAGATACCCTGCCCTATGTGTCAAAACCCTCTCCAAATATGCAGGCTCCAACACGAAGCCCTTGGACCTGGCCCAAGCTGCCACCAAGGCCAGCCTCGGCCAGGCTCGCGCCCTCTCCATTTACCTCAAAACCACCGTCCAGGCTCAGGCCACGAGCACCAGGCAGCGAGCTGCACTGAGTGACTGCATGGCTCAGATCTCCGACTCTGTAACCCAACTAGACAGGACGTTGAGCGAACTGCAACACCTCCAGGTGAAATCATTCCAATGGCAGATGAGCAACGCCCAGACGTGGGCCAGCACAGTCATGTCCAACGGCGGCTCGTGCGTGCGCAGCTTCAGGAATAGCGATGCGGACGCGAAGCTCAAGTTGGACATGAATCGGAGGGTCACCACCGTTACCATGCTCACCAGCAACGCGTTGTATCTTATCACTCGCCTCAGTGAAGGCACGAGTCGCAACCATCGCTCTAATTCCCATCCTTGA 612 0.5654 MPKHNPLSLALFANFFLLFAVAATTAATTPQDEVFRSSCAEARYPALCVKTLSKYAGSNTKPLDLAQAATKASLGQARALSIYLKTTVQAQATSTRQRAALSDCMAQISDSVTQLDRTLSELQHLQVKSFQWQMSNAQTWASTVMSNGGSCVRSFRNSDADAKLKLDMNRRVTTVTMLTSNALYLITRLSEGTSRNHRSNSHP* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1486 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 189 IPR035513 -
Lja4g1486 203 SMART PMEI_2 30 185 IPR006501 GO:0004857
Lja4g1486 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 196 - -
Lja4g1486 203 CDD PMEI-like_3 37 190 - -
Lja4g1486 203 Pfam Plant invertase/pectin methylesterase inhibitor 36 184 IPR006501 GO:0004857
Lja4g1486 203 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 8 196 - -
Lja4g1486 203 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 189 IPR006501 GO:0004857
Lja4g1486 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1486 Lja-Chr4 13713202 13714035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1486 34 191 Carbohydrate Esterase AT3G14310 25.926 5.25e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1486 - - mtr:MTR_4g124855 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1486 4 13713202 13714035 Lja4g1486 4 13713202 13714035 ECH