Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1482 ATGAAAGGTAAGAGTAAGAGTGCTTCGTATGTGGGACATGCAGCTCCATCATTTCCGAGTTCATTTCCTCACCTATTTTCTGGCAAAGAAAAACTCCATTGTTTGATTCCTTGTGCAATTGATCAGGATCCACTCTTCTATGATAGCATTTTTTACTCTTTGGGGCCAAAACCAGGGATAAAGACTCTAAAGAATAATGGAATTCGCAAACAGGTTGCGACTATGTGCAAGGAGAGGCTGCATGAGATTGCGAAGGAGGTTAACTTTGTGCCAGAGAATGTGGAGTGGAAGAACACGTTGAAGCAAAGGTTCATTTGCAGGGACGATGAGGTTCAGGGATGGAAGAGTTATATCAACGAAACCACCTGCAGATGCGAGCTCTGGACCCCTCAGCGCAACTGTTGTATTATCATTCCTATTGTCCTTTTGAGAATATATGAGATGGATGAGATTCTCAAATTGAGCAAGTTAGGGTTTATCCCCTATTTCCTTTGTTGA 498 0.4237 MKGKSKSASYVGHAAPSFPSSFPHLFSGKEKLHCLIPCAIDQDPLFYDSIFYSLGPKPGIKTLKNNGIRKQVATMCKERLHEIAKEVNFVPENVEWKNTLKQRFICRDDEVQGWKSYINETTCRCELWTPQRNCCIIIPIVLLRIYEMDEILKLSKLGFIPYFLC* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1482 165 Gene3D HUPs 3 47 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1482 Lja-Chr4 13662358 13666167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1482 71 165 PP2C-type Phosphatase Gene Family AT1G07430 31.579 7.23e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1482 K01867 - lja:Lj4g3v2214930.1 227.254