Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1474 ATGAGTACTATTCGAGTCATCTCCAGCACCACCATCAAGGCACCGAGTCAGAACGACGGTGACTCAGCTGAGAAAATCGATTTACCACCATGGGATCTCCAATTCCTGTTACTTGAAACCATCCAAAAAGGCCTTCTCTTCCACACAAAAAACCACCAAATCCACCACCTCCAACACTCCCTTTCCTCCACTCTCTCCTTCTTCCCACCCCTCGCCGGCCGCCTCGTCATCACGCGCCACCATGACAACAACAACAACAACAACTCCACCGCCACCTGTCACATCACATGCAACAACGCCGGCGTACTGTTCGTCCACGCCGCAGCAGAAAACACCTCTGTCGCTGACATCCTTCTACCCAACTACGTCCCTCCCATTGTCCACTCCTTCTTCGCACTCAACGGAGCTAAAAACCACGAAGGCACCTCACAGCCGTTGCTGGCGGTGCAGGCGACGGAGCTGCTCGATGGCCTCTTCATCGGCTTCACAATAAACCACTCTGTTGTTGACGGCAAGTCGTTTTGGCTTTTCGTCAACTCCTGGGCTGAAATCTCACGGGGTTCCCTTAAACCATCAAAATCCCCTGTTTTTCAACGTTGGTTTCCAAACTGCATTGAAGTTCCAATTCGATTTCCATTCACAGAGAAGCAAGCAGCTCAACAGTGCTCTGAGAAAATCCTCAACCCTCCCCCTGAGAGGATCTTCCATTTCACGAAGGAGAAAATTGCGGAGCTCAAGATGAAAGCTAACATGGAAGGTAACACGAATCGTGTATCTTCTCTACAAGCGCTTTTGACTCACCTATGGCGGTCTGTGATTCGTTGCAAACAGGTTAAACTGGAAGAAGATGTGAGTTACTTCTTGAGTATAGGAGTTAGGACCAGGATGGTTCCACCATTGCCGGAGGACTATTTCGGAAACGCGTTGGTGGTGGGTGGTGTTACCATGAAAGCAGGGGAGCTGGTGGTGGAAGGTGGGCTAGGGAAGGTTGCTATGGAGATGAATAAGATGGTTTGTTTGCAGTCTGATGAGACGGTGAAGAAGGAGTATGAGACTTGGGTGAAGAAACCGTTGCTGATTTCGCCGACCATGCTGAGCGTTAGTCATTCCTTGGCCACCAGCAGTTCGCCGAGGTTCGATGTTTACGGAAATGATTTTGGGTGGGGGAAGCCGGTGACTGTTCGGAGTGGCCGTGCCAATAAAGGATATGGGAAGATTACAGTGTTTGCTGGGGTAGAGGAAGGTAGCATTGACATTGAAGTGTGCCTTCCTATTGAGATTCTTGAGGCATTGGGAATTGACCCTGAGTTTACTCATACATTTTCCAATTAA 1332 0.4962 MSTIRVISSTTIKAPSQNDGDSAEKIDLPPWDLQFLLLETIQKGLLFHTKNHQIHHLQHSLSSTLSFFPPLAGRLVITRHHDNNNNNNSTATCHITCNNAGVLFVHAAAENTSVADILLPNYVPPIVHSFFALNGAKNHEGTSQPLLAVQATELLDGLFIGFTINHSVVDGKSFWLFVNSWAEISRGSLKPSKSPVFQRWFPNCIEVPIRFPFTEKQAAQQCSEKILNPPPERIFHFTKEKIAELKMKANMEGNTNRVSSLQALLTHLWRSVIRCKQVKLEEDVSYFLSIGVRTRMVPPLPEDYFGNALVVGGVTMKAGELVVEGGLGKVAMEMNKMVCLQSDETVKKEYETWVKKPLLISPTMLSVSHSLATSSSPRFDVYGNDFGWGKPVTVRSGRANKGYGKITVFAGVEEGSIDIEVCLPIEILEALGIDPEFTHTFSN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1474 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 439 - -
Lja4g1474 443 Gene3D - 231 433 IPR023213 -
Lja4g1474 443 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 439 - -
Lja4g1474 443 Pfam Transferase family 4 436 - -
Lja4g1474 443 Gene3D - 2 208 IPR023213 -
Lja4g1474 443 MobiDBLite consensus disorder prediction 1 23 - -
Lja4g1474 443 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1474 Lja-Chr4 13569122 13570471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1474 57 426 Monolignol Biosynthesis Gene Families AT5G48930 27.735 1.27e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1474 - - lja:Lj0g3v0319259.1 555.058