Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1469 ATGGTGGAAAAGGCCGGTAGAAAGGAGGAGGTCGTTACCAGAGAGTACACCATCAACCTCCACAAACGCCTGCATAGCTGCACATTCAAGAAGAAAGCTCCTAAGGCAATCAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGGACTAATGATGTCAGAGTGGATGTGAAGCTCAACAAGGCTATTTGGAGCCAGGGGATCCGGAGTGTTCCCAGGAGGATAAGGGTACGCATTGCTCGTAAGAGGAACGATGATGAGGATGCAAAGGAAGAGCTGTACTCCCTGGTTACTGTTGTCGAAATCCCCAAGGAAGAGCTCAAGGGGTTAGGCACCAAGGTTATCGATGATGAGGATTGA 360 0.4944 MVEKAGRKEEVVTREYTINLHKRLHSCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKAIWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1469 119 Gene3D - 8 119 IPR023621 -
Lja4g1469 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
Lja4g1469 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g1469 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
Lja4g1469 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g1469 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g1469 119 PANTHER 60S RIBOSOMAL PROTEIN L31 5 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g1469 119 PANTHER OS06G0319700 PROTEIN 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1469 Lja-Chr4 13525041 13526372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1469 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 83.193 3.43e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1469 K02910 - gmx:100499742 212.616