Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1463 ATGGCATCAAGAAAAGCCTTGAACCAGTTTCTGATTCTGCCAGTCTTGCTGATAACTTGCTTTATTTTTCTGGGGCAATGTGCTAGGCTGCAGAACACAGAAGAGGGAGAGGATTTGGTCACTGCAACCTGCAAGCACACCCTTCATTTTAAAGTGTGTGTATCTTCCTTGAGATCAGTTCCTAGTAGCAAGAGTTCAGATCTCAAAAAGCTGGCTGAGATTGCATTGAATCTGAGCTCAAATTATGCTGCAAAGACATTGTCCTATGTGTGTAAGCTGAAATCTTCTACTGCTAATGTCACCAACAGTAACAGGTACATGTCTCGTTGCTTAAGTGATTGCATAGAGGAATACAAAGAAGCCAGAGAGAATTTGCAGGACTCAGCAGAAGCATTTGCAGAAGGAGATTATGACCAGGTAGATACATTGGTGTCTGCTGCTATGTCAGATGCTGAGACATGTGAGGATGGATTCAAGGAGGTGTTCATTGATGATGGCAATAAGGATTATTCCAATCCTTCTCTTACTAAGAGAAACAGTTACTTCTTTGAACTGTGTAGTAATGCTCTGGCCATTACAAAATTATTAGTTTGA 594 0.4108 MASRKALNQFLILPVLLITCFIFLGQCARLQNTEEGEDLVTATCKHTLHFKVCVSSLRSVPSSKSSDLKKLAEIALNLSSNYAAKTLSYVCKLKSSTANVTNSNRYMSRCLSDCIEEYKEARENLQDSAEAFAEGDYDQVDTLVSAAMSDAETCEDGFKEVFIDDGNKDYSNPSLTKRNSYFFELCSNALAITKLLV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1463 197 SMART PMEI_2 35 192 IPR006501 GO:0004857
Lja4g1463 197 Pfam Plant invertase/pectin methylesterase inhibitor 38 192 IPR006501 GO:0004857
Lja4g1463 197 PANTHER OS05G0360900 PROTEIN 29 196 - -
Lja4g1463 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 29 196 - -
Lja4g1463 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 197 IPR035513 -
Lja4g1463 197 Coils Coil 111 135 - -
Lja4g1463 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 196 IPR035513 -
Lja4g1463 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 196 IPR006501 GO:0004857
Lja4g1463 197 CDD PMEI-like_1 39 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1463 Lja-Chr4 13459856 13460458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1463 39 194 Carbohydrate Esterase AT3G14310 25.749 1.24e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1463 - - gmx:100785210 247.284