Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1462 ATGGCTACTTCATCTCCTAAACTCTTCCTACTCCTCCTCTTAGCAATCTCCTGCTACTCCTCCAATGCATCCACAAAAACATTTCATGCAAATCTCTCTTCCTTAAAATCTTTGTGCAAAACTACTCCATACCCTGATGCTTGCTTCAATTCATCCAAGCTTTCCATCTCCATAAACATCAATCCAAACATCCTCAACACCCTTCTTCAGTCCCTCCAAGCAGCAATATCAGAAACCACAAAGCTATCTGAACTTTTCAACAATGCAGGAGAACACTCAGACATCAAAGAGAACAAAAGAGGAACAATCCAAGACTGCAGGGAACTCCATCAATCCACCTTGGCTTCCTTAAAAAAATCATTATCTGGGATCCATTCCAAGAACTCAAGGAAGCTAATTGATTCAAGAACCTACCTCAGTGCAGCACTCACCAACAAGAACACATGTCTAGAAAGTTTGGACTCTGCTTCTGGTACCCTGAAGCCAGTGCTTGTGAATTCTGTGATCAACACTTATAAACATGTCAGTAACTCTCTTTCAATGATTCCTAAGCCTGAGAAAAGTGCTCCAACATCAACATGGCTTCCAACCAAAAAAGACCTTGAAATCAGTGATGAAGTGCCTATGCTGGTTGTGGCTGCAGATGGAACAGGGAACTTTAGCACCATAAGTGAAGCCATTGATTTTGCTCCAAATAACAGCTTTTATAGGACAATAATCTATGTGAAAGAAGGGGTGTATGAGGAAAATGTGGAGATCCCTACTTATAAGACCAATATTGTTCTGCTTGGTGATGGAAGGGATGTCACTGCCATTACTGGCAATAGAAGTGTTGTTGATGGCTGGACCACTTTCAGATCTGCAACTTTAGCTGTCTCAGGGGAGGGATTTCTAGCACGTGACATAGCTTTTGAGAACACGGCAGGGCCAGAGAAGCATCAAGCAGTTGCACTGAGAGTGAATGCAGACTTAACTGCTTTCTACAGATGCACCATGCTTGGTTACCAAGACACTCTTTATGTTCACTCCTTCAGGCAATTCTATAGAGAGTGTGACATTTTTGGGACCATAGATTTCATATTTGGCAATGCAGCAGTGGTGTTACAAGCATGTAACATTGTGTCTAGAATGCCACTACCTGGCCAATTCACTGTCATTACAGCACAATCAAGAGATTCCCTTGATGAGGACACAGGAATCTCAATCCAAAACTGCTCAATTTTAGCTACGGATGATTTGTTTTCAAACTCTAGGAGCTTCAAGAGCTACCTAGGGAGACCATGGAGGGTGTATTCTCGTACTGTGTTTCTTGAGTCTTACATTGATGAGTTCATTGACCCTACAGGGTGGACTAAGTGGTCTGATTCTGATGATGAAGAATTGGACTCTTTGTACTATGGAGAGTATGAGAATTATGGGCCTGGGGCAGGGACTGAGAACAGAGTGAATTGGGCTGGGTACCATTTAATGGATTACAATGATGCCTATAACTTCACTGTTTCAGAGTTCATTATTGGGGATGAGTGGCTTGAGCCAACCCTCTGCCTTAGACAATTTCTCACAAAAATGGCATTCCAAGATTTCGACGTCATCTCAGAAAGAAGAAGGAATGAGCAGAGGCAAAAGCTGAAGAAAAGGATCATTATTGGTGTTGTCTCCACCATTCTCCTTGTTGGTATCATTGGTGCTGCATTCTTTGTTGCCACCACAGAATATGGCTTTGGAGGTAACAATGCTAAAGAGGGTCATGACCAAGATTCATCCACAAGCAGCAGACAACATGTTCAACATTCAGAGAAGATGGTGAAACTTGTTTGCAGCAATGCAAGTTACAAGGACAAATGTGAAGGCCCTCTCAACAAGGCAGTGAAGGATGATCCAAAACTTTCAAATCCCAAAGACCTTCTTAAAACTTATGTGAAATATGCAGAGGAAGAGGTGAACAAGGCTTTTAACAAAACCAACTCCTTCAAGTTCGAATCTGAAGAAGAGAAAGGAGCATTTGAGGATTGCAAGCAGCTGATTCGCGACGCGAAAGACGACTTAGCAACCTCCATCTCAGAATTGGGCAAGATTGAACTCTCCAAGCTCTCTTCAAGATCTCCTGACTTGAACAGTTGGCTCAGTGCTGTCATCTCTTTCCAGCAAACCTGTGTCGATGGTTTCCCCGAGGGAAAGCTGAAGAATGACATCCAGGGTCTCTTCAATGGTACCAATGAGTTCATTAGCAACTCCCTCGCCATCGTTTCGCAGGTGTCCACGGTGCTTTCTACATTCCAAACACTTGCAAGCGGTCGTTTGTTGCTGTCTGAGAATTCCAATTCCCCTGCTGCTTCTTTGGACAGTGATGGATTTCCTTCTTGGGTTCATGTTGATGACAGAAGGTTGTTGAAGGCTGCAGACAACAGGCCTAAACCTAATGTCACCGTGGCGAAAGATGGCAGTGGAGATTTCAAAACCATTTCTGAAGCTTTGAACAAAATCCCTGCAACTTATAAAGGAAGGTATGTGGTTTATGTTAAAGAAGGAGTGTACGATGAGCAAGTGACAGTGACCAAGAAAATGCAAAATGTTACCATGTATGGAGATGGATCCCAAAAGAGTATCATCACTGGCAGCAAAAACTTCAGGGATGGAGTCAGAACTTTCCAAACTGCAAGTTTTGTGGTGCTTGGAGATGGATTCTTGGGCCTAGCAATGGGATTCAGAAACACTGCAGGCCCTGAAGGGCACCAAGCAGTGGCTGCAAGAGTACAAGCAGATCGCTCAGTTTTCGCCAATTGCCGCTTTGAGGGATACCAAGACACCCTCTACACACAAACCCACAGACAGTTCTACAGAAGCTGCATAGTTGCAGGCACAATAGACTTCATCTTTGGTGATGCAGCTGTGGTGTTCCAAAACTGCATCATGGTTGTGAGAAAACCAATGGACAACCAGCAAAACATGGTCACAGCTCAAGGGAGAATGGATAAGCACCAACCCACTGGAATTGTTCTTCAAAAATGTACAATCAAAGCTGATCCCAGTTTGATTCCTGTGAAGGACAAGATCAGAAGCTACCTTGGGAGGCCATGGAAGGAGTTCTCAAGAACTATTGTTATGGAATCTGAAATTGGTGATTTCATTCATCCTGATGGGTGGACACCTTGGATGGGGAACTTTGCACTCAACACATTGTATTATGCTGAGTTCAACAACAATGGACCTGGTGCAAGCACCAACGCTAGGGTCAAGTGGCCTGGCTACAAGGTTATTAACAGAGATGAAGCTAGCAAGTTCACTGTGGGAACTTTCTTGAGAGGCTCTTGGGTTCAGGGCTCTGGTGTGCCTGCTGTGCAGGGCTTCTACAAATAA 3357 0.4382 MATSSPKLFLLLLLAISCYSSNASTKTFHANLSSLKSLCKTTPYPDACFNSSKLSISININPNILNTLLQSLQAAISETTKLSELFNNAGEHSDIKENKRGTIQDCRELHQSTLASLKKSLSGIHSKNSRKLIDSRTYLSAALTNKNTCLESLDSASGTLKPVLVNSVINTYKHVSNSLSMIPKPEKSAPTSTWLPTKKDLEISDEVPMLVVAADGTGNFSTISEAIDFAPNNSFYRTIIYVKEGVYEENVEIPTYKTNIVLLGDGRDVTAITGNRSVVDGWTTFRSATLAVSGEGFLARDIAFENTAGPEKHQAVALRVNADLTAFYRCTMLGYQDTLYVHSFRQFYRECDIFGTIDFIFGNAAVVLQACNIVSRMPLPGQFTVITAQSRDSLDEDTGISIQNCSILATDDLFSNSRSFKSYLGRPWRVYSRTVFLESYIDEFIDPTGWTKWSDSDDEELDSLYYGEYENYGPGAGTENRVNWAGYHLMDYNDAYNFTVSEFIIGDEWLEPTLCLRQFLTKMAFQDFDVISERRRNEQRQKLKKRIIIGVVSTILLVGIIGAAFFVATTEYGFGGNNAKEGHDQDSSTSSRQHVQHSEKMVKLVCSNASYKDKCEGPLNKAVKDDPKLSNPKDLLKTYVKYAEEEVNKAFNKTNSFKFESEEEKGAFEDCKQLIRDAKDDLATSISELGKIELSKLSSRSPDLNSWLSAVISFQQTCVDGFPEGKLKNDIQGLFNGTNEFISNSLAIVSQVSTVLSTFQTLASGRLLLSENSNSPAASLDSDGFPSWVHVDDRRLLKAADNRPKPNVTVAKDGSGDFKTISEALNKIPATYKGRYVVYVKEGVYDEQVTVTKKMQNVTMYGDGSQKSIITGSKNFRDGVRTFQTASFVVLGDGFLGLAMGFRNTAGPEGHQAVAARVQADRSVFANCRFEGYQDTLYTQTHRQFYRSCIVAGTIDFIFGDAAVVFQNCIMVVRKPMDNQQNMVTAQGRMDKHQPTGIVLQKCTIKADPSLIPVKDKIRSYLGRPWKEFSRTIVMESEIGDFIHPDGWTPWMGNFALNTLYYAEFNNNGPGASTNARVKWPGYKVINRDEASKFTVGTFLRGSWVQGSGVPAVQGFYK* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1462 1118 PANTHER PECTINESTERASE 536 1116 - -
Lja4g1462 1118 Gene3D - 204 517 IPR012334 -
Lja4g1462 1118 Gene3D - 801 1116 IPR012334 -
Lja4g1462 1118 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 600 752 IPR035513 -
Lja4g1462 1118 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 183 IPR035513 -
Lja4g1462 1118 Pfam Plant invertase/pectin methylesterase inhibitor 34 181 IPR006501 GO:0004857
Lja4g1462 1118 Pfam Plant invertase/pectin methylesterase inhibitor 601 748 IPR006501 GO:0004857
Lja4g1462 1118 PANTHER PECTINESTERASE 206 510 - -
Lja4g1462 1118 SUPERFAMILY Pectin lyase-like 804 1111 IPR011050 -
Lja4g1462 1118 SMART PMEI_2 30 181 IPR006501 GO:0004857
Lja4g1462 1118 SMART PMEI_2 597 748 IPR006501 GO:0004857
Lja4g1462 1118 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Lja4g1462 1118 TIGRFAM PME_inhib: pectinesterase inhibitor domain 590 752 IPR006501 GO:0004857
Lja4g1462 1118 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 183 IPR006501 GO:0004857
Lja4g1462 1118 Gene3D Invertase/pectin methylesterase inhibitor family protein 598 753 IPR035513 -
Lja4g1462 1118 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lja4g1462 1118 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 184 IPR035513 -
Lja4g1462 1118 CDD PMEI-like_3 604 754 - -
Lja4g1462 1118 PANTHER PECTINESTERASE 206 510 - -
Lja4g1462 1118 PANTHER PECTINESTERASE 536 1116 - -
Lja4g1462 1118 SUPERFAMILY Pectin lyase-like 209 513 IPR011050 -
Lja4g1462 1118 CDD PMEI-like_3 37 187 - -
Lja4g1462 1118 MobiDBLite consensus disorder prediction 578 597 - -
Lja4g1462 1118 ProSitePatterns Pectinesterase signature 2. 951 960 IPR033131 -
Lja4g1462 1118 Pfam Pectinesterase 807 1102 IPR000070 GO:0030599|GO:0042545
Lja4g1462 1118 Pfam Pectinesterase 210 507 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1462 Lja-Chr4 13449708 13458565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1462 33 513 Carbohydrate Esterase AT2G26440 65.354 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1462 - - gmx:100784679 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1462 4 13449708 13458565 Lja4g1462 4 13449708 13458565 ECH
Lja4g1462 4 13449708 13458565 Lja6g1946 6 47311726 47314320 PCT