Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1461 ATGGTTCTCTCTTCAACACTCACTCCCACCACACTCATCCTCTTGCTAATCCTGTCCCTCCAAGCCTGCACCACCCAATCTTCTGCTGCTTCCGTCACTGATTTCTCAGGATCAGCCTGCCTCAGAGTTTCAACAACCAGATTCATTGACTCTGTAAGCAAAGTCATTGATGTTCTGGGAGATGTCTCATCCATTCTCAAACCCTTCGCCAGCAGAATTTTTCACAACTTTCGTCTCACAAACGCCGTGTCTGACTGTCTGGACTTGATTGACATGGCTTCTGAAGATCTTAGATGGTCTATTTCCGCCACCCAGAACCCCAAAGGGAAGAATAATAGCACTGGAAACTTAAGCTCTGATCTGAAAACATGGCTGAGTGCTGTACTATCACATCCAGAGACTTGCATTGAAGGATTTGAAGGTACAAACAGCATTGTGAAGGGTCTTGTATCAAGTGGACTAGGGGAAGTGATGTCCTTGGTGAGAGAGCTTCTTTTCCAAGTGGTCCCTGATTCAGATCCATCAAGCACTAGCAAGGGTGGTGAATTTCCTTCATGGGTTAAAGCAGAGGATGAGAAGCTCTTACAGGAAAATGGGGTGGTTCCGGATGCGGTGGTGGCGGCGGATGGGAGCGGGAACTACACGACGGTGATGGAGGCGGTGCTGGCGGCACCTGATTATAGCATGAAACGTTTTGTGATATATGTGAAGAAGGGTGTTTATGAAGAGTATGCTGAGATCAAGAAGAAGAAATGGAACATCATGATGGTTGGTGATGGCATGGATGTTACGGTTATTTCCGGTAACCGGAGCTTTGGGGACGGCTGGACCACTTTCAAATCAGCTACATTTGCTGTCAGTGGTAGAGGATTCATAGCACGAGGCATCACCTTCCAGAACACGGCAGGCCCAGAGAAACACCAAGCAGTAGCCCTGAGATCCGACTCCGACCTCGCCGTGTTCTTCCGATGTTCCATCACCGGCTACCAAGACAGCCTCTACCCTCACACCATGCGGCAGTTCTACAAAGAATGCAGAATCACCGGCACGGTGGATTTCATCTTTGGCGACGCCACCGCCGTCTTCCAAAACTGCAACATCCAAGCTAGAAAAGGCTTGCAGGATCAGAAAAACACAATCACAGCTCAAGGGCGCAAAGATCCTGGTCAATCATCTGGTTTCTCGTTTCAGTACTGCAATATCACTGCAGATTCTGAACTTCTACCTTCAGTTGGTTCCATCCAAACGTACCTTGGAAGACCGTGGAAGGAGTATTCAAGAACAGTTTTCATGCAATCGTTCATGAGTGATGTGGTGAGTTCACAAGGGTGGTTAGAGTGGAATACAAGTTTTGATGATACATTGTTCTATGGTGAGTATTTGAATTATGGAGCTGGTGCTGGAGTTGGTAACAGAGTGAAATGGGGAGGGTATCATGTGTTGAATGATTCAGAGGCTGGGAAATTCACTGTTAATCAATTTATTGAGGGGAATCTGTGGTTGCCTTCTACAGGTGTAGCTTACACTGGATTATCATGTCTCAGAGTTTCTCCAAACAGATTCATTGACTCTGCAAACAAAGTCATTAATCTTCTTCAAAATGTCTCATACAATCTCTCACCCTTCACCAAAGTTAATCAGGATAATGATAATCGTCTCTCAAATGCCATTTCTGACTGTCTAGAATTGTTTGACATGGCGTACGAAAATCTTAAATGGTCTATTTCCGCTACCCAGAACCACCAAGGGAATAAGAACAATGGCACTGGAAACTTAAGCTCTGATTTGAGAACATGGATAAGTGCTGTACTTTCTTATCAAGAGACTTGCATTGATGGATTCGAAGGTACAAACAGCAATGTGAAGGATCATGTATCAGGTGGACTTGACCAGGTGATATCATTGGTGAAGAATGAGCTACTTCTTCAAGTGGTCCCTGACTCTGATCCGTCAAACATTAGCAACAGTGGTGAATTTCCTTCTTGGGTCAAAGCAGAGGATGAGAAGCTTCTGCAACAGGATGCACCGCCGCCGCCAGCGGATGTGGTGGTGGCGGCGGATGGGAGCGGGAACTACACGACGGTGATGGATGCGGTGAAGGATGCACCTGAGTACAACATGACGCGTTATGTGATACATGTGAAGAAGGGTATTTATAAGGAGTATGTTGAGATCAAGAAGAAGAAATGGAACATCATGATTGTTGGTGATGGCATGGATGTGACAACTATTTCTGGTAACCGGAGCTATGGTCACGACAATATAACCACCTTCAGAACAGCTACATTTGCTGTAAGTGCTATAGGCTTCATAGCAAGAGACATCACCTTTGAGAACACAGCAGGGCCAGAGAATAAACAAGCAGTAGCACTAAGATCAGACTCCGACCTCTCTGTGTTCTACCGATGTGGGATCAAAGGCTACCAGGACAGCCTCTACGCTCACTCCCAAAGGCAATTCTACAAGGAATGCAGAATCAGGGGCACGGTTGATTTCATCTGCGGCAACGCGGCCGCGGTGTTCCAGAACTGCCTAATCCAACCCAAGAAGCCCTTGAAGGATCAGAAAAACACAATTGCTGCACAAAGTCGAACACATCCGAATCAAACCAGTGGCTTCTCCTTCCATAACTGCACCATTATTCCAGATCCTGATTTTCAACCTTCAAATGGTTCCATCCAAACATTCCTTGGAAGACCCTGGAAGAATTTTTCAAGAACAGTTTTCATGGAATCGTTCATGAGTGAGATGATACATCCAGAAGGGTGGTTAGAGTGGGAGACTAATACGACTTATGATGACACATTGTTCTTTGGCGAGTACCAGAATAAAGGACCAGGTAGTGGAGTTGCTAACAGGGTGAAATGGAGAGGGTATCATGTGTTGAATAATTCACAAGCTATGGACTTCACTGTGAATCAATTTATTAAGGGGGATTTGTGGTTGCCTTCCACAGGTGTAAGTTACAATGCTGGATTGTTAGTTTGA 2988 0.4565 MVLSSTLTPTTLILLLILSLQACTTQSSAASVTDFSGSACLRVSTTRFIDSVSKVIDVLGDVSSILKPFASRIFHNFRLTNAVSDCLDLIDMASEDLRWSISATQNPKGKNNSTGNLSSDLKTWLSAVLSHPETCIEGFEGTNSIVKGLVSSGLGEVMSLVRELLFQVVPDSDPSSTSKGGEFPSWVKAEDEKLLQENGVVPDAVVAADGSGNYTTVMEAVLAAPDYSMKRFVIYVKKGVYEEYAEIKKKKWNIMMVGDGMDVTVISGNRSFGDGWTTFKSATFAVSGRGFIARGITFQNTAGPEKHQAVALRSDSDLAVFFRCSITGYQDSLYPHTMRQFYKECRITGTVDFIFGDATAVFQNCNIQARKGLQDQKNTITAQGRKDPGQSSGFSFQYCNITADSELLPSVGSIQTYLGRPWKEYSRTVFMQSFMSDVVSSQGWLEWNTSFDDTLFYGEYLNYGAGAGVGNRVKWGGYHVLNDSEAGKFTVNQFIEGNLWLPSTGVAYTGLSCLRVSPNRFIDSANKVINLLQNVSYNLSPFTKVNQDNDNRLSNAISDCLELFDMAYENLKWSISATQNHQGNKNNGTGNLSSDLRTWISAVLSYQETCIDGFEGTNSNVKDHVSGGLDQVISLVKNELLLQVVPDSDPSNISNSGEFPSWVKAEDEKLLQQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKKGIYKEYVEIKKKKWNIMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNSQAMDFTVNQFIKGDLWLPSTGVSYNAGLLV* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1461 995 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 44 509 - -
Lja4g1461 995 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 517 993 - -
Lja4g1461 995 PANTHER PECTINESTERASE 44 509 - -
Lja4g1461 995 PANTHER PECTINESTERASE 517 993 - -
Lja4g1461 995 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 532 642 IPR035513 -
Lja4g1461 995 Gene3D Invertase/pectin methylesterase inhibitor family protein 512 644 IPR035513 -
Lja4g1461 995 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 165 IPR035513 -
Lja4g1461 995 SUPERFAMILY Pectin lyase-like 203 509 IPR011050 -
Lja4g1461 995 Pfam Pectinesterase 203 498 IPR000070 GO:0030599|GO:0042545
Lja4g1461 995 Pfam Pectinesterase 681 979 IPR000070 GO:0030599|GO:0042545
Lja4g1461 995 CDD PMEI-like_4 512 640 - -
Lja4g1461 995 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 160 IPR035513 -
Lja4g1461 995 CDD PMEI-like_4 28 172 - -
Lja4g1461 995 SMART PMEI_2 517 642 IPR006501 GO:0004857
Lja4g1461 995 SMART PMEI_2 27 167 IPR006501 GO:0004857
Lja4g1461 995 ProSitePatterns Pectinesterase signature 1. 706 725 IPR018040 -
Lja4g1461 995 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Lja4g1461 995 Pfam Plant invertase/pectin methylesterase inhibitor 517 627 IPR006501 GO:0004857
Lja4g1461 995 Pfam Plant invertase/pectin methylesterase inhibitor 41 151 IPR006501 GO:0004857
Lja4g1461 995 SUPERFAMILY Pectin lyase-like 677 991 IPR011050 -
Lja4g1461 995 Gene3D - 198 511 IPR012334 -
Lja4g1461 995 Gene3D - 679 993 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1461 Lja-Chr4 13428613 13444115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1461 511 994 Carbohydrate Esterase AT3G43270 54.839 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1461 K01051 - gmx:100814987 705.286