Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1455 ATGTGCTTGGCTTTCAGAGTTATGAAATCTAGGACACAATCTCTTCACACCCCACCTGAACCTTCTTCTTCTTCTTCTTCATCATGGGAATCTTCCAGTTTCAACCCTCTACCTTTGACCACTTTTGGTGAGATCATGGAGAGGCTGCCAGAAACTAAGGACACGTGTGCTGTGTGCTTGAACCAGCTGAAAATTGAAGATGAAGTTAGGGAGCTCATGAATTGTTACCATATTTTCCACAAGGAATGCATAGATAGATGGGTGGAGCATGACCATGAGAGTGAAAACCACAACCCTACTTGCCCTCTATGCAGAGCCCCTTTACTGAGTTCTTGTTGTCTTTCATCAGAGAGCTCAAGCTGTGTGTCTCCTCCTCAGCCTAGCTGGGCTGTGGAGAGACTTCTCTATCTCTTTGGGGATGATCTGCTTCCATGTTAG 438 0.4566 MCLAFRVMKSRTQSLHTPPEPSSSSSSSWESSSFNPLPLTTFGEIMERLPETKDTCAVCLNQLKIEDEVRELMNCYHIFHKECIDRWVEHDHESENHNPTCPLCRAPLLSSCCLSSESSSCVSPPQPSWAVERLLYLFGDDLLPC* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1455 145 PANTHER RING ZINC FINGER PROTEIN-RELATED 6 144 - -
Lja4g1455 145 ProSiteProfiles Zinc finger RING-type profile. 56 105 IPR001841 -
Lja4g1455 145 SUPERFAMILY RING/U-box 50 110 - -
Lja4g1455 145 MobiDBLite consensus disorder prediction 9 34 - -
Lja4g1455 145 Pfam Ring finger domain 54 105 IPR001841 -
Lja4g1455 145 SMART ring_2 56 104 IPR001841 -
Lja4g1455 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 110 IPR013083 -
Lja4g1455 145 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 144 - -
Lja4g1455 145 MobiDBLite consensus disorder prediction 10 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1455 Lja-Chr4 13363288 13363725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1455 21 142 C3H Transcription Factor Family AT5G20885 50.746 3.69e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1455 K16281 - gmx:100306203 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1455 4 13363288 13363725 Lja4g1455 4 13363288 13363725 ECH