Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1450 ATGGCGACGACCAACTTTTCCGCATGTCCGGCACCAATGAAGGCCGTGTCCAACGGGGCCTTCCAACATGAAAACCCCCTAGACTATGCGCTTCCTTTGTTGATCCTCCAGATATGCTTGGTGGTCACGTTCACCAGATGCATTGCATTCATTTGCAAACCCCTCAGGCAACCCAGAGTCATTGCAGAGATCATTGGAGGAATACTACTGGGGCCATCTGCAATTGGACGAAGTGAGAAATTCTTGGACACAGTTTTCCCAAAGAAGAGCTTAACTGTCCTTGACACACTAGCCAACATTGGCCTCTTGTTCTTCTTGTTTCTGGTGGGTCTTGAGCTTGACATGCGTTCCATCAAGCGCACTGGTCGCAAGGCCTTGTGCATTGCCTTGTGTGGGATCTCTGTCCCTTTTGTTTTAGGCATAGGCACATCGGTTGTCCTCCGAAAAACCATATGCAAAGGCGTTGAGCCTATCGCCTTCCTCGTCTTCATGGGAGTCGCGCTCTCCATCACTGCCTTCCCTGTCCTGGCTAGGATCCTAGCTGAGCTCAAACTCCTCACTACAGATGTCGGCCGCATGGCGATGTCAGCCGCTGCTGTCAACGATGTTGCCGCCTGGATCCTCCTTGCACTGGCAATAGCCCTGTCTGGCTCCAACTCATCACCTTTGGTTTCTCTCTGGGTGTTGCTATCTGGTGCTGCTTTCATCGTTTTCGCGGTCTTCGTCATTAGACCTGTGCTTGGAGCTATGGCGCGGCGTTCCCCTGAGGGTGAACCGGTGAAGGAGCTCTACATTTGCATCACATTGACACTAGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATCCATGCCCTCTTTGGAGCTTTTGTGGTTGGTATAATCATGCCTAAAGATGGTCCCTTTGCTGGTGTGTTGATTGAGAAGATTGAAGACTTGGTTTCTGGTCTCTTTTTGCCACTCTATTTTGCATCTAGTGGATTGAAGACCAATGTGGCCACCATCAGTGGAGGACTTTCCTGGGCACTACTAGCACTTGTTATCTTCAATGCTTGCTTTGGAAAGATCATTGGCACAGTTGTTGTTTCATTGTTATGCAAGGTTCCTGTTAGAGAATCCCTTGCACTTGGATTTCTCATGAACACCAAGGGGTTGGTTGAACTTATTGTTCTCAACATTGGAAAGGATCGCAAGGTACTGAATGACCAAGCATTTGCAATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATTGTGGTAGCTGTGTATAAACCTGCACGCAAAGGAGCACCTTACAAGCACAAGACAATTCAGCGCAAGGATCCTGAGTCCGAGCTCAGAGTGCTAGCATGCTTCCACAGCACCCGCAACATCCCCACATTGATCAACCTCATCGAATCTTCCCGTGGAACCAGAAAGCGCGGTAGGCTCTGCATATATGCAATGCACTTGATGGAACTCTCAGAGCGACCTTCAGCCATCACAATGGTTCACAAGGCGCGCAACAACGGCATGCCCTTCTGGAACAAGAAGCAGAATGATGAGGATCAAATGGTGATTGCTTTCCAGACTTATGGAAAATTGAGCAGTGTCAATGTTCGCCCCATGACAGCCATATCAGCTCTCAACACCATCCATGAGGATATCTGCACTAGCGCTCACCAGAAGCGCGCTGCTATGATTCTCCTCCCATTCCACAAGCACCAGCGTATGGATGGAACAATGGAGTCACTAGGACACTCATTCCATGTGATCAATGAGCTTGTCCTGAGCCACGCTCCTTGCTCGGTCGGAATTCTGGTTGATCGCGGTCTCGGAGGTACAAGCCAAGTCCAAGCTAGTGAACTTTCCTTGCAGGTTGTTGTGCCTTTCTTCGGAGGACGCGATGACAATGAAGCGCTTTCTTACGCGATGAGAATGGCTGAGCATCCTGGGATTATTCTCACTGTGGTGAAGTTTGTGGCTGTGCCTGGGAAGACATTGGCTTTTGGTGCTAAATTGGTTGGGGTAACATCAGACAAGAACCAAAAGGTAGCAATAGAGGAGCTTGATGGAAGTAGCCATGATGGTAATAAACAACAACAGGATGAACAATTGTGGAATGAGTTGTTGAGTGCAAGCAGCAACAACAATGAGTCAATTAAGTATGAGGAGAGGCTTGTGGAAAGCAAAGGGGATATTGAGACAGCATTGAAGGAAATGAGCAGGAGCAATCTGATTGTTGTTGGTAGAATGCCACCAGTAGCACCTTTGACTAACAGAAGTGATTGTCCTGAGCTTGGACCTGTGGGAAGCTACATGGCTTCTTGTGATTTCTCCACTACTGCTTCAGTTTTGGTTATTCAGCAGTATAACCCCACAACCGATATTCATCCACTGGTGATGGAGGAATCTGATATCCCAGAAGTGCCTGACACACCAAGGCATTATTAA 2448 0.4812 MATTNFSACPAPMKAVSNGAFQHENPLDYALPLLILQICLVVTFTRCIAFICKPLRQPRVIAEIIGGILLGPSAIGRSEKFLDTVFPKKSLTVLDTLANIGLLFFLFLVGLELDMRSIKRTGRKALCIALCGISVPFVLGIGTSVVLRKTICKGVEPIAFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNSSPLVSLWVLLSGAAFIVFAVFVIRPVLGAMARRSPEGEPVKELYICITLTLVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGLFLPLYFASSGLKTNVATISGGLSWALLALVIFNACFGKIIGTVVVSLLCKVPVRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVVAVYKPARKGAPYKHKTIQRKDPESELRVLACFHSTRNIPTLINLIESSRGTRKRGRLCIYAMHLMELSERPSAITMVHKARNNGMPFWNKKQNDEDQMVIAFQTYGKLSSVNVRPMTAISALNTIHEDICTSAHQKRAAMILLPFHKHQRMDGTMESLGHSFHVINELVLSHAPCSVGILVDRGLGGTSQVQASELSLQVVVPFFGGRDDNEALSYAMRMAEHPGIILTVVKFVAVPGKTLAFGAKLVGVTSDKNQKVAIEELDGSSHDGNKQQQDEQLWNELLSASSNNNESIKYEERLVESKGDIETALKEMSRSNLIVVGRMPPVAPLTNRSDCPELGPVGSYMASCDFSTTASVLVIQQYNPTTDIHPLVMEESDIPEVPDTPRHY* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1450 815 PANTHER CATION/H + ANTIPORTER 6 812 - -
Lja4g1450 815 Gene3D - 33 434 IPR038770 -
Lja4g1450 815 PANTHER CATION/H+ EXCHANGER 3 6 812 - -
Lja4g1450 815 Pfam Sodium/hydrogen exchanger family 40 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja4g1450 815 Gene3D - 493 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1450 Lja-Chr4 13300438 13305938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1450 1 807 Antiporter Super Family AT3G17630 70.668 0.0 1126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1450 - - lang:109362195 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1450 4 13300438 13305938 Lja4g1450 4 13300438 13305938 ECH