Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1449 ATGACGACCATGGTGGTGTTGGTACTAGGATTATTGTTGTGCACCTTTGCTGTTACTGTTGCAGGTAGCAAACATGTAAGCATCAAGAACAAACTAGGATCTGGGAAAGATAATGATATGGGCAAGCAAAACATTGAAGATGGGAATGAATTTGGGTGGGACTTCTCTGACAATGTTTTTGGGACTACCATATTTTTCTGTGATTTGGCATGGGAGAGAGTCCAGCAGTATTATATTGATGCTTATTCCTTTGGAAGAGACTTGGTGCGATGCAAGAGTGGATGTTCATGA 291 0.4124 MTTMVVLVLGLLLCTFAVTVAGSKHVSIKNKLGSGKDNDMGKQNIEDGNEFGWDFSDNVFGTTIFFCDLAWERVQQYYIDAYSFGRDLVRCKSGCS* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1449 96 Pfam Plant self-incompatibility protein S1 36 95 IPR010264 -
Lja4g1449 96 PANTHER - 11 93 IPR010264 -
Lja4g1449 96 PANTHER PUMILIO HOMOLOG 15-LIKE 11 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1449 Lja-Chr4 13295797 13296087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1449 25 95 Carbohydrate Esterase AT3G16970 29.577 2.61e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1449 - - lja:Lj4g3v2215620.1 192.2