Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1447 ATGCCAATGTCTATGTCGTGTGGAGGCATGAAGAAGCTGTGGATGTTTGTGTTTGTGGGTTTGGTGATTGGGAAATGGGTGGAAGGGTTTGAGAATGCTACTTTGGAAGAAGTGCAATATGTCACTGGAAGAGGTTTCTATAGACCTTTGATGGTTGGACTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTATGCCTGGATGGGTCTTTACCGGGTTACCACTTGCACCGTGGATATGGTTCAGGATCAAACAGTTGGCTCATACAATTGGAGGGCGGAGGCTGGTGTGGAACTATCAGAAATTGTGTTTATAGTAAGAAAACACGTCATGGTTCATCAGCATTTATGGAAAAATATATACCATTTATTGGGATACTAAGCAACAAGGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTGAAAATTCGCTATTGTGATGGTGCATCATTTAGTGGGGACAGTCAAAATGAGGCAGCAGGGTTGTATTTCAGAGGGCAACGCATCTGGCAAGCTGCTATGGAAGATTTAAAGTCAAAAGGGATGCGCTATGCTAAACAGGCTCTTCTATCTGGATGTTCTGCTGGAGGTTTATCATCTATACTACACTGTGATGAATTTAGCGGATTGTTTCCTAGAACCACAAGAGTGAAGTGCTTAAGTGATGCTGGATTATTCCTTGATTCTGTTGACGTATCTGGCCATCGCAATTTAAGGAATATGTTCAGAGCTGTGGTCACCTTACATGGAGTGCAAAGGAACCTTCCAAGGAGTTGTACCAGTCACCTCAATCCAATTCTGTGCTTTTTCCCTCAGCACTTAATTGCCAGTGTTAGGACACCACTATTTCTTCTGAATGCAGCATATGATTCTTGGCAGGTTCAAGAGAGTGTTGCTCCACCATCTGCTGATTATCACTGGAATTGGATGGAATGCAGAAAAAATTATGCACGTTGCAGTTCACCACAGATACAGTATCTCCAAGGTTTCCGTAGTCAAATGCTTAGAGTTACAAGAGGCTTCTCAAGGGCTCGTAAAAATGGGTTGTTCATAAATTCATGTTTCTCGCATTGCCAGTCTGAAAGACAAGATACATGGTTTGCTCGCAATTCTCCTCGTATTGGAAATAAAGGGATTGCAGAGTCTGTTGGGAATTGGTTTTTTGACAGAAGTAGTGTCCAGGCTATCGGTTGTGCTTACCCTTGTGACAAGACTTGCCATAATTTGGTTTTCAAGTGA 1248 0.4231 MPMSMSCGGMKKLWMFVFVGLVIGKWVEGFENATLEEVQYVTGRGFYRPLMVGLTLINGAAAKGAVCLDGSLPGYHLHRGYGSGSNSWLIQLEGGGWCGTIRNCVYSKKTRHGSSAFMEKYIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFSGDSQNEAAGLYFRGQRIWQAAMEDLKSKGMRYAKQALLSGCSAGGLSSILHCDEFSGLFPRTTRVKCLSDAGLFLDSVDVSGHRNLRNMFRAVVTLHGVQRNLPRSCTSHLNPILCFFPQHLIASVRTPLFLLNAAYDSWQVQESVAPPSADYHWNWMECRKNYARCSSPQIQYLQGFRSQMLRVTRGFSRARKNGLFINSCFSHCQSERQDTWFARNSPRIGNKGIAESVGNWFFDRSSVQAIGCAYPCDKTCHNLVFK* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1447 415 PANTHER NOTUM-RELATED 16 414 IPR004963 GO:0016787
Lja4g1447 415 Pfam Pectinacetylesterase 50 395 IPR004963 GO:0016787
Lja4g1447 415 PANTHER PECTIN ACETYLESTERASE 16 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1447 Lja-Chr4 13266473 13272150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1447 51 415 Carbohydrate Esterase AT1G57590 70.137 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1447 K19882 - gmx:100791571 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1447 4 13266473 13272150 Lja4g1447 4 13266473 13272150 ECH
Lja4g1447 4 13266473 13272150 Lja1g0504 1 4522321 4527223 ECH
Lja4g1447 4 13266473 13272150 Lja5g1329 5 13318857 13322380 ECH