Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1440 ATGGGGGATGGGGTGGTGTTGTTGGATTTCAGTCTCGGTATGTTTGGGAATAGAGTTAAGATTGCACTAGCAGAGAAAGGGGTCAATTATGAGCACAAGGAAGAGGATTTGATCAACACCAAAAGTGCACTGCTTCTGCAAATGAACCCAGTCCACAGGAAAATCCCTGTCCTCATCCATAATGGTAAGCCCATATGTGAATCTCTCATCATTGTTGAGTATATTGATGAGGTCTGGAAGGACAAAGCTCCACTTTTGCCCACTGATCCATACCATAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATCACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAACTTGAGGCAGAGAGGAAGGAGTTAGTAGAGAATTTGAAGCTGATTGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGGTGAAGCATTTGGGTTTCTTGACATTGCTTTGATTCCTTTCTATAGGTGGTTTTCTACTTGGGAGACAGTAGGAAAATTGAAGATAGACTCCCCAAAACTCATTGCATGGGGAGAGAGGTGTTTGCAGAGAGAAAGTGTGTCCAAATTTCTTCCAAACGAAAAGGATATCCGTGAATTTGTTCACACGGTCAGGAAAAAATTCGGGGTGGACTAA 657 0.4368 MGDGVVLLDFSLGMFGNRVKIALAEKGVNYEHKEEDLINTKSALLLQMNPVHRKIPVLIHNGKPICESLIIVEYIDEVWKDKAPLLPTDPYHRAQARFWADFVDHKVHEVAKKIWTGKVDELEAERKELVENLKLIEEFLGDKPYFGGEAFGFLDIALIPFYRWFSTWETVGKLKIDSPKLIAWGERCLQRESVSKFLPNEKDIREFVHTVRKKFGVD* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1440 218 CDD GST_C_Tau 90 208 IPR045074 GO:0004364|GO:0006749
Lja4g1440 218 Gene3D Glutaredoxin 1 88 - -
Lja4g1440 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 211 IPR045073 -
Lja4g1440 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Lja4g1440 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Lja4g1440 218 SFLD Main (cytGST) 3 216 - -
Lja4g1440 218 Pfam Glutathione S-transferase, C-terminal domain 122 184 - -
Lja4g1440 218 SFLD Main.3: Omega- and Tau-like 3 216 IPR045073 -
Lja4g1440 218 Gene3D - 89 218 - -
Lja4g1440 218 SUPERFAMILY Thioredoxin-like 7 107 IPR036249 -
Lja4g1440 218 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 211 - -
Lja4g1440 218 Coils Coil 112 139 - -
Lja4g1440 218 CDD GST_N_Tau 5 79 - -
Lja4g1440 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 207 IPR010987 -
Lja4g1440 218 Pfam Glutathione S-transferase, N-terminal domain 13 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1440 Lja-Chr4 13194666 13195773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1440 1 218 Glutathione S-transferase Gene Family AT1G17180 59.091 1.32e-92 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1440 K00799 - gmx:100781460 338.961