Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1375 ATGCAGGTAGTGTTACTATTGTGTCTAGTTCTCACTTCAGCAGTTGCAACAACCACATTGAAGGGAGACTATGGCTATGGTGGTGATACTACTGGCTGTCCATTAGCAACCGATTTGTACCAATACACTTGCCCGGAAGCAGAGGCCATCATCTTCTTTTGGGTTGAACAGGCTGTCTCTCAAGATCCAAGAATGGCAGCCTCACTGCTCAGGCTACATTTTCATGATTGCATTGGTTGTGATGCTTCAGTGTTGCTGGATGACACAAAGGACTTTGTTGGTGAGAAAACTGCAGGTCCAAATTTGAATTCACTGAGAGGGTTTGAAGTAATAGACCAAATCAAATCAGAACTAGAACTAGTTTGCCCACAAACTGTTTCTTGTGCTGACATACTTGCTATCGCTGCTCGGGATTCAGTTCTTCTGTCTGGAGGTCCAACATGGGAGATGCAAATGGGAAGAAAAGATAGCATCACTGCAAGCAAGGGAGCAGCAAACAGTAATATCCCAGGACCAAACTCGACTGTTGATATGCTAGTAGCTAAGTTTGAGAGTGCTGGCCTCACACTCAAAGACATGGTTGCCCTCTCAGGCGCGCACACTATCGGAAAAGCTCGTTGCTCGACATTCAGCTCTCGTTTGCAGGGAAGTGGTGACTTAGGTAGTCAAAATATGAATATTGATTTCATTGCATCATTGCAACAGATATGCTCAGTTCCAGATAACAGCAACCAAGTTGCACAGCTTGACCTGGCTACTCCAGCAACGTTTGATAACCAATACTATGTAAATCTTCTTTCTGGAGAAGGATTGCTTCAATCAGACCAAGTGCTGGTGAATGGGAATGATCAGACACTTCAGATTGTGGAGACCTACGCGGAGGACCCATTGGCTTTCTTTGAGGACTTTAAGGATTCAATGGTGAAAATGGGAAGCTTGGGATCACTCACGCAGAGTAATGGCCAGATTCGTACAAACTGCCGAGTTATTAACTAG 996 0.4478 MQVVLLLCLVLTSAVATTTLKGDYGYGGDTTGCPLATDLYQYTCPEAEAIIFFWVEQAVSQDPRMAASLLRLHFHDCIGCDASVLLDDTKDFVGEKTAGPNLNSLRGFEVIDQIKSELELVCPQTVSCADILAIAARDSVLLSGGPTWEMQMGRKDSITASKGAANSNIPGPNSTVDMLVAKFESAGLTLKDMVALSGAHTIGKARCSTFSSRLQGSGDLGSQNMNIDFIASLQQICSVPDNSNQVAQLDLATPATFDNQYYVNLLSGEGLLQSDQVLVNGNDQTLQIVETYAEDPLAFFEDFKDSMVKMGSLGSLTQSNGQIRTNCRVIN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1375 331 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 ProSiteProfiles Plant heme peroxidase family profile. 34 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PANTHER PEROXIDASE 40 10 330 - -
Lja4g1375 331 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 SUPERFAMILY Heme-dependent peroxidases 35 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 Gene3D Peroxidase, domain 2 170 311 - -
Lja4g1375 331 Pfam Peroxidase 55 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 CDD secretory_peroxidase 35 330 IPR033905 GO:0004601|GO:0042744
Lja4g1375 331 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Lja4g1375 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lja4g1375 331 PANTHER PEROXIDASE 72-RELATED 10 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1375 331 Gene3D - 40 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1375 Lja-Chr4 12316746 12318020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1375 39 331 Peroxidase AT4G16270 64.310 6.84e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1375 K00430 - gmx:100787637 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1375 4 12316746 12318020 Lja4g1375 4 12316746 12318020 ECH