Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1356 ATGTTCCCATGGATGATCATTGGCTTTGCCACCATCACATTCCTCATCTTCATACACCGTGTCGTGAAGTTCTCAACACGTCCCTCACTCCCACTCCCTCCGGGCCCAAAACCATGGCCCATAATAGGAAACTTTCCCCATATGGGCCCCGTGCCGCACCACTCCCTCGCAGCCTTGGCCCGAGCCCACGGCCCGCTCATGCACCTCAAATTGGGCTTTGTGGACGTCGTGGTGGCGGCGTCGGCCGCCGTGGCAGAACAGTTTTTGAAGGTTCATGATGCAAATTTTAGTAGCCGGCCGCCCAACGCCGGAGCTAAGTACATAGCTTATAACTATCAGGATCTTGTGTTTGCTCCGTACGGTGCACGGTGGCGATATCTCCGGAAAATCACCAACCTCCACCTCTTCTCCGGCAAGGCCTTGGATAATTTCAAACACTTGCGTCAGGAAGAGGTATCAAGATTGACACGGAACATATCAAAATCCAACTCAAAAGTTGTCAACTTGGGACAACTACTTAATGTATGCACTACCAATGCATTATCCAGGGTAATGATCGGAAGGAGAGTGTTCAACGACGGTGACGGTGGGTGTGATCCTAGAGCTGATGAGTTTAAGGCCATGGTGGTGGAGTTAATGGTGTTAGCGGGTGTTTTCAACATAGGTGACTTTATTCCTTCTTTGGAGTGGCTAGACCTTCAAGGAGTGCAAGCTAAGATGAAGAAATTGCACAATAGGTTTGACGAATTTTTAACCAGCATTATTGAGGAACACAATACTTCTTCCAAGAGTGAGAATCATAAGGATTTGTTGAGTACGTTGTTGTCGCTTAAAGATGTTCCTGATGATGATGGAAACAAACTCAATGATATTGAGATCAAAGCACTGCTTCTGAACATGTTCACAGCTGGGACTGACACGTCAGCTAGCACAACAGAATGGGTCATTGCAGAACTGATCCGTAGCCCAAGAATTCTAGCCCAGGTCCAACAAGAATTGGACACAGTCGTGGGCCGAGAAAGAAACGTGAGAGAAGATGACTTGCCTCATCTCCCATACTTGCAAGCAGTAGTGAAAGAAACCTTCCGTCTTCACCCATCAACCCCTCTTTCACTGCCACGTGTCGCATCTGAGAGCTGTGAGGTACTGGGTTACCACATACCAAAGGGGTCCACTCTCTTGGTGAACGTGTGGGCCATAGCCCGTGACCCTAAAGAATGGGCTGAGCCATTGGAGTTCAAGCCCGAAAGGTTCCTAGAGGGTGATAAGGTTGATGTTGATGTTAAGGGCAATGACTTTAAGGTGATACCCTTTGGTGCTGGACGTAGGATATGTGCTGGGATGAGCCTTGGGCTTCGTATGGTTCAGCTGTTAACTGCAACTCTGGTCCATTCGTTTAACTGGGAGCTAGAAAATGGGCTTAACCATGAAAAGCTCAACATGGATGAAGCTTATGGGCTAACATTGCAACGGGCTGTGCCTTTGTCAGTGTACTCTAGGCCCAGGCTCTCGCCACATGTGTATGCAGCCTCTCATTGA 1539 0.486 MFPWMIIGFATITFLIFIHRVVKFSTRPSLPLPPGPKPWPIIGNFPHMGPVPHHSLAALARAHGPLMHLKLGFVDVVVAASAAVAEQFLKVHDANFSSRPPNAGAKYIAYNYQDLVFAPYGARWRYLRKITNLHLFSGKALDNFKHLRQEEVSRLTRNISKSNSKVVNLGQLLNVCTTNALSRVMIGRRVFNDGDGGCDPRADEFKAMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHNRFDEFLTSIIEEHNTSSKSENHKDLLSTLLSLKDVPDDDGNKLNDIEIKALLLNMFTAGTDTSASTTEWVIAELIRSPRILAQVQQELDTVVGRERNVREDDLPHLPYLQAVVKETFRLHPSTPLSLPRVASESCEVLGYHIPKGSTLLVNVWAIARDPKEWAEPLEFKPERFLEGDKVDVDVKGNDFKVIPFGAGRRICAGMSLGLRMVQLLTATLVHSFNWELENGLNHEKLNMDEAYGLTLQRAVPLSVYSRPRLSPHVYAASH* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1356 512 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja4g1356 512 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 501 - -
Lja4g1356 512 Pfam Cytochrome P450 33 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1356 512 PANTHER FLAVONOID 3'-MONOOXYGENASE 11 501 - -
Lja4g1356 512 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1356 Lja-Chr4 12163168 12166393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1356 4 509 Cytochrome P450 AT5G07990 65.753 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1356 K05280 - gmx:547475 812.372