Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1354 ATGGAGAGCAAGTTCCTTATAAGAGAGTATGATGTAAATAGAGATGTTAAAGTGGTGGGGAAGCTTGAAAGGGACTGTGAGATCGGGAGTACTCAACAAGGGATCTCCATTTTCACCAACATGATGGGAGACCCTTTATCTAGGATTAAGTTCTACCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAATGGAGAGCTTGTTGGAGTAGTTGGAGGATGCATCAAGAGTGTGCAGACTACTCCAGCTTCTGGATCACTCTTGAAGATGGGTTGCATACTAGGCCTCAGAGTCTCTCCTACACAGAGGAGAAAAGGGGTTGCACTAAAACTTGTGAACTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAGCACGCATTCCTAGCCACTGAAAAGAACAATGAAGCCTCAAAAAACCTATTTACCAACAAATGCAACTATCATCACCTCAGCTCACTTGTCATATTTGTCCATCCCATTAGTTTCCCTCCAAAGCATCACATTTCCAATAATGATATCAAAATAGAGAAGTTAAACATAGACCAGGCAATTTCCTTGTACAGAAGAATCATGAGGGCCAAAGAGTTGTATCCACTAGACATGGAAGTTATTTTGAAGGAGAAGCTCACCCTTGGAACTTGGGTGAGTTATTACAAAAATGAAGGCTGGCTCAACTTGGAAAGAAAGTTAGAAAGTGAAGAACGCATTGGCAATGAAATTACCAACAGCTCATGGATTGTGTTTAGCATATGGAACACTTGTGAAGCTTATAAGCTTCAACTCAAGTCTCAGCCACTTAGGTTTCTTTTAAATCATGCAAAGGACAAGATTTTCCCTTGTTTGAGAATGTTGGTGAGTGACTCACTTTGTGGGCCTTTTGGGTTTCTCTTCCTCTATGGACTCCATGGAGAGGGAGAGAACCTTGGGGAGCTTATGGAATCTATATGGAGGTTCACATCAAAAATGGGAGAAAATTTGAAGGATTGTAGAGTGGTTATCACTGAGTTAGGGTTAGGGGATCCACTTGTAAACCATATCCCTCAAACAGCTTCTATGTCGTGTATCGATGATGTGTGGTACACAAAAAGGCTTTCACTTTCAAGCCACAGTGATGAATCGCTGATGATGAAGAGACAACTCGGTAATGTGTTTGTTGACCCAAGAGAATTTTAG 1179 0.4182 MESKFLIREYDVNRDVKVVGKLERDCEIGSTQQGISIFTNMMGDPLSRIKFYPLHVMLVAELLENGELVGVVGGCIKSVQTTPASGSLLKMGCILGLRVSPTQRRKGVALKLVNSVEEWMLRNGAEHAFLATEKNNEASKNLFTNKCNYHHLSSLVIFVHPISFPPKHHISNNDIKIEKLNIDQAISLYRRIMRAKELYPLDMEVILKEKLTLGTWVSYYKNEGWLNLERKLESEERIGNEITNSSWIVFSIWNTCEAYKLQLKSQPLRFLLNHAKDKIFPCLRMLVSDSLCGPFGFLFLYGLHGEGENLGELMESIWRFTSKMGENLKDCRVVITELGLGDPLVNHIPQTASMSCIDDVWYTKRLSLSSHSDESLMMKRQLGNVFVDPREF* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1354 392 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 392 - -
Lja4g1354 392 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 5 212 IPR000182 GO:0016407
Lja4g1354 392 CDD NAT_SF 57 130 - -
Lja4g1354 392 Gene3D - 7 162 - -
Lja4g1354 392 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 1 392 - -
Lja4g1354 392 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 150 IPR016181 -
Lja4g1354 392 Pfam Acetyltransferase (GNAT) family 59 149 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1354 Lja-Chr4 12143783 12145567 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja4g1354 Acetyltransf_1 1e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1354 - - gmx:100814448 572.778