Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1351 ATGGCGTTTTGGTGGCCATTGCTCGTTCTAGCATTCGCTTACGGTATCTGCAGGTTCCTTCTCATGCTCATTCCTCCCAAGGTTCCTTCCATCGACGTTGACGCCTCCGATGTGTTGGACGATGGAAATCAAGCACAGGAGAACAGCTTCATTTACGTACCGCCGAGGGGAACGTCGCAACAATCAGGGAAGATTGTTCAGTGCTATGAACCTGCAACTATGAAATATTTGGGATATGTTCCCGCATTGACGCATGATGAGGTCAAGGATCGAGTGGCTAAAGTAAGAAAGGCACAAAAAATGTGGGCTAAGTCCAGCTTCAAGCAAAGACGCTTGTTTTTGCGTATACTATTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCACGTGATACTGGAAAGACGATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTATCAGAGGGAGAGCAGTGGCTAAGGCCTGAATACCGGTCTTCTGGAAGATCAATGCTTCATAAGAAAGCCAAAGTAGAATTTCACCCCCTTGGTGTTATTGGAGCCATTGTTTCGTGGAATTATCCTTTCCACAATATATTCAATCCTATGCTGGCAGCAGTTTTTTCTGGAAATGGTATTGTGATTAAGATATCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCATTGGTATCTTCAGTAGATAAAGTCATATTTGTGGGATCTCCTGGTGTTGGTAAGATGATAATGAGAAATGCTGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCACAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGGGCTGAGCGGTTTTATGTCCACAGGGAAATTTATTCTTCTTTTGTTAGTAAAGTTACTAAAATAATAAAGTCTGTCACAGCTGGTCCACCACTTGTTGGAAAGTTTGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTGTAAATGATGCTTTGGACAAAGGGGCTGAAATTGCTGCACGTGGAAGTTTTGGACATATAGGTGAAGATGCAGTTGATCAGTATTTCCCCCCTACTGTGATTGTGAATGTAAACCACTCAATGAAATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCGATAATGAAATTTAGCTCTGATGAGGAGGCTGTCAAGCTTGCCAATGACTCAAAATATGGGCTTGGCTGTGCTGTTTTCTCTGGAAGTCAGAGCCGTGCCAGAGAGATAGCTTCACAGATACATTCCGGGGTAGCTGCAATTAATGATTTTGCGGCATCATACATGTGTCAGTCCCTACCATTTGGGGGTGTGAAACATAGTGGATTTGGACGATTTGGCGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTTAAAGCAGTTGTTGAAGATCGATGGTGGCCATTTGTCAAAACCAAGATACCTAAGCCTATTCAGTATCCTGTTGCAGAGAATGGATTTGAATTCCAGGAGTCACTTGTTGAAGCACTTTATGGGATCAGCATATGGGACCGTTTGCGAGCATTAGTTGATGTTTTAAAAATGCTTACCGAGCAGCAGAACCCTGCTGGCAGCAGCAGTAAGAGAAGAAATGACTAA 1797 0.4318 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTHDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLRPEYRSSGRSMLHKKAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMRNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIIKSVTAGPPLVGKFDMGALCMHEHSEKLEGLVNDALDKGAEIAARGSFGHIGEDAVDQYFPPTVIVNVNHSMKLMQEEAFGPIMPIMKFSSDEEAVKLANDSKYGLGCAVFSGSQSRAREIASQIHSGVAAINDFAASYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGFEFQESLVEALYGISIWDRLRALVDVLKMLTEQQNPAGSSSKRRND* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1351 598 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Lja4g1351 598 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Lja4g1351 598 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Lja4g1351 598 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Lja4g1351 598 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Lja4g1351 598 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
Lja4g1351 598 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Lja4g1351 598 CDD ALDH_F15-22 69 531 - -
Lja4g1351 598 Pfam Aldehyde dehydrogenase family 60 527 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1351 Lja-Chr4 12108939 12116513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1351 1 594 Aldehyde Dehydrogenase Gene Family AT3G66658 80.135 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1351 - - gmx:100802990 1157.51