Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1340 ATGGCCAAGTCGAAGAATCACACTGCTCACAACCAGTCCTACAAGGCACACAAGAACGGCATCAAGAAGCCAAAGAGGCATCGCCACACTTCCACCAAGGGGATGGACCCTAAGTTTCTGAGGAACCAGAGGTACGCGAGGAAGCACAACAAGAAGGGTGCTGAATCCGTCACTGAAGAAGAGTAA 186 0.5108 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKGAESVTEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1340 61 MobiDBLite consensus disorder prediction 1 32 - -
Lja4g1340 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lja4g1340 61 Gene3D - 1 61 - -
Lja4g1340 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lja4g1340 61 MobiDBLite consensus disorder prediction 1 61 - -
Lja4g1340 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1340 Lja-Chr4 12033793 12034481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1340 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 81.967 2.40e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1340 K02905 - jre:108994772 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1340 4 12033793 12034481 Lja4g1340 4 12033793 12034481 ECH