Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1331 ATGTTCTCGCTTCTCAAAAGACACTGTTTCTTCGGCATCGCTGTCTTAGCCATCTTCCTCCTCTCAACGCCGCCGTTTACGGCGGCCCAATCCTGCAACGGTATACTCCTCACCTACGCCTACACCGCCGGCAAGCAGTTACCGCCGAACGTCACCGACCCTGCGAAGCAGCCGTACAAGTTCGAGTCCACGCTCACCGTGCTCAACAACGGCCTCGACGAGCTCAAGTCCTGGAAGGTCTTCGTCGGGTTTCAGCACGATGAGCTCTTGGTCTCCGCCTCCAATGCGGTGCTCGCCGACGGGACTACCCTCCCCGCCGCCGTTGGCAACGGTACCGTCTTCGCCGGGTACCCCATGACCGATCTCAAGACCGCTGTGGCCACCGCCGGTGACTTGACCCAGATGCAGGCTCAGATCGACCTCGTTGGCACCGTGTTCGGGGTTGCGCCGCCGAGTATTCCTTTACCCTCGAAAATCGAGCTCGCCGTTGATGGATTTCTCTGCCGCAAAGCCACTGGTCAAGGGAAGAATGTGACTAATATGTGTTGCACAAGAGATCCCAAGTTCAAAGCAAACATCACTACTGATGAGAAGTTTCTGCCTCGTCAAAATGGTGATCTTACTATTATGTATGATGTGATCAGAACTTATGACTCTAGTTACTGGGCTGAGGTTGCGATTGCGAACCATAACGCTCTCGGTCGCCTTGACAATTGGAGATTGAGCTGGGATTGGATGAATGATGAGTTTATAAACTCAATGAAAGGGGCTTATCCATCTGTTGTGGATGTTTCTGGCTGTGTGTTTGGTAAGCAAGGAACATTCTACCAGCAACTTGATTTTTCCACTGTGTTGAATTGTGAGAGGAGGCCAACCATAGTTGATCTTCCTCCCACTAAGTTCAATGATACAGTCCTTGGGAAAATCCCTTCTTGCTGCCGGAACGGTACCATATTGCCACCATCCATGGACCCTAGCATGTCTGTTTCAAGGTTCCAGATGGAGGTTTTCAAAATGCCGCCGGCGCTTAATCGCTCCCAGCTTTCGCCGCCCCAGAATTGGAAGATTAGCGGCACACTCAACCCTGACTACAAATGTGGCCCTCCCATGCGGGTTAGTCCCACTGAGAATCCGGATCCATCTGGGGTACCGTCGAACAAAACTGTCATGGCCAGTTGGCAGGTTGTGTGCAACATAACAACTACCAAGAGAACATCAAGCAAATGCTGTGTCTCATTTTCAGCTTATTACAATGAGTCAGTTATACCATGCAAAACTTGTGCATGTGGATGCCCCGCGAACACTGGAAGAACTTGTAGTGCTACTGCACCAGCTATGTGGCTTCCACCGGATGCTCTTCTTATTCCTTTTGAGAACCGAACTGCCAAGGCTGTTGCTTGGGCTGACCTTAAACATCTACCAGTGTCTAACCCTTTGCCCTGTAGTGATAACTGCGGCGTGAGCATCAACTGGCATTTATTCACAGACTACAGGAAAGGTTGGACTGCAAGGGTAACACTTTTTAACTGGGGTGGCACTAATTTTGCTGACTGGTTTGCTGCAGTACAAATGGACAATGCAGCTGCAGGTTTTGAGAAAATGTACTCATTCAATGCAACCCTCCTAGATGGCGTGAATAATACAATAATCATGCAAGGTTTGCCCGGATTGAACTACCTTGTAGCTGAAGCTGACGGAGCTAATCCACTGAGAGATCCTAGGGTTCCTGGTAAACAACAATCAGTAATCTCATTCACAAAGAAAGCTACTCCTGGAATCAATGTAGTTCGTGGAGATGGATTTCCCTCTAAAGTCTTCTTCAATGGAGAGGAATGCTCTCTTCCTTCAGTGATTCCAAGCAGTGGTTTCAGGAAGGGCTTTCCACGGGCTACTTTGGCGTTCCTAACACTGTTGTGGATCGTCTTGATCCGGTAA 1935 0.4966 MFSLLKRHCFFGIAVLAIFLLSTPPFTAAQSCNGILLTYAYTAGKQLPPNVTDPAKQPYKFESTLTVLNNGLDELKSWKVFVGFQHDELLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVATAGDLTQMQAQIDLVGTVFGVAPPSIPLPSKIELAVDGFLCRKATGQGKNVTNMCCTRDPKFKANITTDEKFLPRQNGDLTIMYDVIRTYDSSYWAEVAIANHNALGRLDNWRLSWDWMNDEFINSMKGAYPSVVDVSGCVFGKQGTFYQQLDFSTVLNCERRPTIVDLPPTKFNDTVLGKIPSCCRNGTILPPSMDPSMSVSRFQMEVFKMPPALNRSQLSPPQNWKISGTLNPDYKCGPPMRVSPTENPDPSGVPSNKTVMASWQVVCNITTTKRTSSKCCVSFSAYYNESVIPCKTCACGCPANTGRTCSATAPAMWLPPDALLIPFENRTAKAVAWADLKHLPVSNPLPCSDNCGVSINWHLFTDYRKGWTARVTLFNWGGTNFADWFAAVQMDNAAAGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAEADGANPLRDPRVPGKQQSVISFTKKATPGINVVRGDGFPSKVFFNGEECSLPSVIPSSGFRKGFPRATLAFLTLLWIVLIR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1331 644 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Lja4g1331 644 Pfam COBRA-like protein 221 400 IPR006918 GO:0010215|GO:0031225
Lja4g1331 644 PANTHER COBRA-LIKE PROTEIN 7 8 643 - -
Lja4g1331 644 PANTHER COBRA-LIKE PROTEIN 7 8 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1331 Lja-Chr4 11895089 11897791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1331 32 625 COBRA Gene Family AT4G16120 68.280 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1331 - - gmx:100803929 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1331 4 11895089 11897791 Lja4g1331 4 11895089 11897791 ECH
Lja4g1331 4 11895089 11897791 Lja6g2285 6 51814382 51816800 PCT