Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1283 ATGGAGGATTCGTTAGGGCAAAAGTGGAAGCATCGAGAGTTCGCTCTGGCATCAGTTACAGACCTCTCTTTGGCTTCTTCTTCTTCTGCTGCTGCGGCTTCGCCGGGGACGGCTCGATTCAGCTCCGACGGTCTCCATATTCATCAAGATTCTCATCCGATTCATCTTGATGTTGATCTTCGAACTGTTCAGTTATTCAGATTGAGTCCTGTTCAATCGGTCTGCATGGTGGAAGGCTCTGATGCTGGGAACGAGGCGCCATATTCCGCGGGAGTCACTATCCAGTTTAGAAATGAGGAAGAGAGTGCGGCCTTCCACTGCGTAGTACAAAAATGGAAGAAGGAAGGCAATGGTCAAGGAGGAAACTTGCCAAATGGAAATTTAATAACATCTAAAAGCAAATTCGATGAGAAGATAGAGTCATCTTCTTCAAAAATGTACTTTCATTATTATGGACAGCTTCTGCATCAGCAAAACATGTTGCAGGACTATGTGCGGACAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCTGATTTCACTGGTCGTGTAGTAGTTGATGTGGGTGCTGGTAGTGGGATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAGCATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTAATAGCTGGGAACCCCAAACTGGCCCAACGAATAACCGTGATTAAAGGTAAAGTTGAGGATGTTGAATTGCCTGAGAAAGCAGACATTCTGATCTCTGAGCCCATGGGGACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCAAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGCCGTTGGAAGGATTCATATGGCACCTTTCACTGATGAATATTTATTTATTGAAGTTGCTAATAAGGCTCTGTTCTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACACCCTTACATGGGACCGCATTTCAAGGATACTTTTCTCAGCCTGTGGTAGATGCTTTTGATCCAAGATTGTTAGTAGCTCCCCCAATGTTCCATGTGATAGACTTCACCAAAATAAAGGAGGAAGAACTGTATGAAATTGACATCCCTCTGAAATTTGTAGCCTCTGTGGGTGCCCGAGTACATGGATTGGCATGCTGGTTTGATGTACTTTTCAATGGAAGCACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCGCCGACAACCCATTGGTACCAGCTACGCTGTGTTCTCCCTCAGCCAATTTATGTCGTGGCAGGACAAGAAATGACTGGAAGGCTTCATTTAATTGCCCACAACGCACAGAGTTATACAATATATCTAACATTGTCAACTAAAATGTGGGGTCCTGGTGCTGAGCAAGGAGGTATTCTTCAAACCTCGTCCTGTAAGCTTGATTTGAAAGAACCCTACTATAGGATGTCTCAACCGCAAGCTTATCCAGTAGCCCAAGATCAGCAACCACTTATTCAGACACAGGATATACATATCCAATCTCAGGAATTGGACGAAACAGAGATAATGCAACAGCCTTCGCCTAATTCATGTGCTCAGGTTGATTCACTGATGCGGAATTTTTAA 1614 0.4418 MEDSLGQKWKHREFALASVTDLSLASSSSAAAASPGTARFSSDGLHIHQDSHPIHLDVDLRTVQLFRLSPVQSVCMVEGSDAGNEAPYSAGVTIQFRNEEESAAFHCVVQKWKKEGNGQGGNLPNGNLITSKSKFDEKIESSSSKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPAVGRIHMAPFTDEYLFIEVANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLVAPPMFHVIDFTKIKEEELYEIDIPLKFVASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLPQPIYVVAGQEMTGRLHLIAHNAQSYTIYLTLSTKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPVAQDQQPLIQTQDIHIQSQELDETEIMQQPSPNSCAQVDSLMRNF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1283 537 CDD AdoMet_MTases 186 286 - -
Lja4g1283 537 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 140 455 IPR025799 GO:0016274|GO:0018216
Lja4g1283 537 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 495 - -
Lja4g1283 537 Gene3D - 289 497 - -
Lja4g1283 537 Pfam Ribosomal protein L11 methyltransferase (PrmA) 182 256 - -
Lja4g1283 537 Gene3D Vaccinia Virus protein VP39 127 287 IPR029063 -
Lja4g1283 537 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 150 461 IPR029063 -
Lja4g1283 537 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 495 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1283 Lja-Chr4 11429786 11437607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1283 147 436 C2H2 Transcription Factor Family AT3G12270 33.442 1.29e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1283 K05931 - gmx:100780736 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1283 4 11429786 11437607 Lja6g2225 6 51171034 51177851 PCT