Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1278 ATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTACAAATGTAATAGTTATGGAGGTATTCCTTGTAAGACCACCAATGGCTACGAAACCCTTCCTGAAGTTCGTAGGACAAGTAGTTTCTCTTGTTTGTCAGGCGCAGCCTTAAGTGCAAATGCCACACTAGCCAACACAAACATCTGCAATGGTAAGATAGGAGGGGAAATCCTTCCAAGTTGGGACTCACCAAATTCCTTTCGTAAAGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACAGATTATCATCTTCCCTCCCAAGTAATCTATCTTACCTAAGCTGCAGTCCTTCTACTCCAAGTGATATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATACTCCTAGAAGTGAAGGATTTCTTAATGCTGGTGAACTTCAAGTCGCAGGAGGAGCAGCTGGCGAAGATAGAGTTCAAGCAGTTTGCTCTGAAGAAAATGGTTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCGGCTGACTTTCTTGCCGGTACCCTGTACGACACCATCATATCTTACTTGAATAAGTCAATTTTGGGATTGGAGCCGGGTTCCATTGAAACTTCTAACAATGTGGATTTGGGTGAATCCCTCCTGAATAAGTTGGATGGTAGTCTTATTTTTCAGGAGGATCAATCTCTGTCGACATTTACGGGGAGAAATGATTCTAATCATGGTTTTGCAAAGGATAGTCTATCTACTAAGTCTGGAGCATCATGTGAGTCATCTTCAAACGGGGTACTTGATAGCCTCCAAAGCGCACTTAGTCAGGCTGAAAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCGTGTGTTCTGCTTTTGCTTCTTCATGGTAATGATTTGTACACACTTAATCTAGGTGATAGCAGAGCAGTATTGGCTACATGTGGTGCAGGTGACACAATAAATAACCGTGATAGACTCCAAGCTATACAGCTTACTGACAGTCATAATGTTGATAACGAAGCTGAAAGAGCAACACTTCTTGGTGATCATCCTGATGATCCGAGGGTCATTGTAGGGGGAAAAGTGAAAGGTAAACTGAAGGTTACTCGTGCATTCGGGGTTGGCTACTTGAAAAAGAAGAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGCGATCTTAAGAGCCCGCCATATGTTTCCACTCAACCATCAGTGAATGTCCGAAAAATCTCAAATTGTGATCAATTTGTTATACTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTAGTGGAGTCTTATATCTTGAGCAATCCTTTTGGTGATCCTGCAAAGTTTCTCATAGAGCAGCTTGTAGTTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCAGGGAGGAGAAGAAAGTACCATGACGATGTGACGGTAATTGTGATCATGCTTGGGATGAATCAGCGGACTTCAAAGGCTTCAACTTGCATCTAG 1572 0.4218 MLSPEGELKISFGYKCNSYGGIPCKTTNGYETLPEVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSKLDRLSSSLPSNLSYLSCSPSTPSDILEYDSCTLKSMSDTPRSEGFLNAGELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLNKSILGLEPGSIETSNNVDLGESLLNKLDGSLIFQEDQSLSTFTGRNDSNHGFAKDSLSTKSGASCESSSNGVLDSLQSALSQAENDFLYMVEQEMEERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCGAGDTINNRDRLQAIQLTDSHNVDNEAERATLLGDHPDDPRVIVGGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYVSTQPSVNVRKISNCDQFVILGSDGLFDFFSNDEAVKLVESYILSNPFGDPAKFLIEQLVVRAADSAGFSMEELMNVPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1278 523 Gene3D - 114 519 IPR036457 -
Lja4g1278 523 PANTHER PROTEIN PHOSPHATASE 2C 2 522 IPR015655 GO:0004722|GO:0006470
Lja4g1278 523 CDD PP2Cc 149 508 IPR001932 -
Lja4g1278 523 ProSiteProfiles PPM-type phosphatase domain profile. 136 510 IPR001932 -
Lja4g1278 523 SUPERFAMILY PP2C-like 150 511 IPR036457 -
Lja4g1278 523 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 522 - -
Lja4g1278 523 Pfam Protein phosphatase 2C 258 464 IPR001932 -
Lja4g1278 523 SMART PP2C_4 127 508 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1278 Lja-Chr4 11398007 11402729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1278 4 523 PP2C-type Phosphatase Gene Family AT3G16560 62.049 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1278 - - gmx:100808304 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1278 4 11398007 11402729 Lja6g2221 6 51148927 51152188 PCT