Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1232 ATGGAGTGCAATAAAGAAGAGGCCTTAAGGACCAGGGACATTGCTGAGAAGAAGATCGAAAGCAGGGATTTCACGGGAGCTCGTAAATTTGCTCTCAAGGCTCAGCGGTTGTTTCCTGATTTGGAAAATATATCTCAAATGCTTGTTGTTTGTGATGTGCACTGTTCTGCTGAGCAGAAATTATTTGGTAATGAGATAGACTGGTACGGAATTCTCCAAGTTGAACAGACAGCTGATGATGCAACAATTAAGAAGCAATACAGGAAGTATGCTCTCCAATTGCATCCTGACAAAAACAAGTTTGCTGGTGCAGAATCTGCTTTTAAGTTGATTGGGGAAGCTCAAAGAGTGCTTTTGGACAAAGAAAAACGAACTCAGCTTGACATGAAGCGCAGGGTTCCTACAAGCAAAACTGCTATGCCACGCCATAATCCGCAGAAAGCTCCTACGAATTTCAATTCTGCGACGAAAACCAACAATGTCAAGCCCAAATTCACAAACACGAAAGCTCAGCAGCAGCGACAGCAACAACAACAAAGACAGCAAGCGAAGCAGCAACAAAATGGTAGCCGCCCTACTTTTTGGACCCACTGCCCATTTTGTTCTGTTAAGTATCAGTATTACAGAGAAGTTTTAAATAAACCTCTTCGCTGCCAACATTGCCAGAAGCCCTTCATTGCATGTGATGCGAATGTTCAAGGTACATCACCAGCAACTAATTCAAGTCAGCAAGCTTTTAACCAGCAGAAAGATGGTCTGAATCATGATGCTTCCAGGGTGGGTGTTGAATCTCAAGGCAACTTGCATGCTGAGAAGTCCAATACAGGGCCTTATGAGAAAAAAGGCCCTACTAATGTCTCTCAAAAGCCAAATGGAAAGAGAAAGAGGAATCAGGTTGCAGAATCCAGTCAAAGTTCTGATTTTACAAGCAGCAGTGGTTCTGAAGATGATATGTTTGCTGGTGGGGATGGTTTTCCTGGTGTAGGAAACCATTCGACTTATGCGGAAGAACAACGGCGCAGATCTTCACGTCAAAAACAAAATGTTTCATACAAAGATAATGTGTGTAACGAAGGTGATGACTTATTAAGACCCTCAAAAAGCGGTCATGGTGAGACCACTGAAGTGAAAGTTCAGAATGGTTTTGCTGCTGACCCTTCATATCCAACTTCTAAAGCGGCAAATCATCCAAATGTTTATCTCTATCCTGAAGCAGAGTTCAGTGACTTTGACAAGGGCAGGGAAAAAAAATGTTTTGCCGCAGGGCAGATTTGGGCTATTTATGATCCAACAGATGGCATGCCTAGATTCTATGCTTTAATCAGTAAAGTTCTCTCTCCTGAGTTCAAGCTGCAGATAACATGGTTTGTACCACATCCTGATGACAGCGATGAAATCAACTGGGTAAAGGCAGAATTGCCCGTTGCTTGTGGGAAGTATAGACTTGGTGGCACTGACATCACTGAAGATCACCTGATGTTCTCTCATCTGGTTATGTGTGGAAGAGTTAGCCGGAATATTAAAGTGTATCCTAGAAAGGGTGAAACTTGGGCTCTTTTCAAGAATTGGGATATCAAATGGTACATGCATCCAGAATCTAATAAGCAGTATGAATTTGAGTTTGTTGAAATCTTGTCAGATTACGTCGAAGGTGAGGGTGTGCGCGTTGCATACTTATCTAAGTTGAAAGGTTTTGCATGCCTCTTTCGAATTACGAAAGAAGATAGCCAGACATTTCAAATTCCACTCGGGGAATTATTTAGATTCTCTCACAGAGTTCCATCTTTCAAAATGACTGGTCAGGAAGGAGTAGGTGTTCATATAGGATCTTATGAACTTGATCCTGCATCTTTGCCATTGAATCTTGAAGGTATTGCTGTTCCTGAAAATTTTGATGTCAAGATTGGCCAAAGTTCATCTGACAGGGATAATAGAAGCAATTTGGCTGAGAACAAGGATTCAGTTGATGATATTGATGATCTTCTTGCTTCTCCAGCTTCGACTCAGGGTCCCATTGAAATTCCAGATTCTAAATTCTTCAATTTTGATTCCAGGAGGTCCCTTGAAAAGTTTCAGATTGGCCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATATTATGGTCAGATTAGTAAGATTGAGACCAGCCCAGATCTTGAATTGCATGTTCATTGGCTTACTTGCTGCTGGCTACCTGAGGATACCATTAAATGGGAAGAAGAAGATATGCCTATTTCCTGTGGCAGATTTAATGTTCGTAAATCAGCTGAATTTCTCAATGTTTATAATGACACATCTTCTATTTCACATCAAGTGCACGCTGATGCTGTTGTTCAGAATAAGCGTTACGCCATCTTTCCAAAGCAAGGTGAAGTCTGGGCACTATATAGAAATTGGTCAAGTGGAATCAAAAGTTCTGACCTGAAAAATTGGGAGTATGACATAGTTGAAGTTCTTGGAGAAACTGATGTGTTCATAGATGTTTTAATATTGGAGCATGTCCCTGATTTCAGTTCAGTTTTCAGGGCCAAATCAAATCTAGGGCCGTCTGTCAACCTTAGAAAAATATCCAAAAAAGAGTTGCTTAGGTTCTCCCACCAAATCCCAGGTTTCAGGCTGACAGAAGAAGAGCATGGCAATCTGAGAGGCTTCTGGGAACTTGATCCCGGTGCGCTACCAGTTCATTACTATCATGTATAA 2709 0.4149 MECNKEEALRTRDIAEKKIESRDFTGARKFALKAQRLFPDLENISQMLVVCDVHCSAEQKLFGNEIDWYGILQVEQTADDATIKKQYRKYALQLHPDKNKFAGAESAFKLIGEAQRVLLDKEKRTQLDMKRRVPTSKTAMPRHNPQKAPTNFNSATKTNNVKPKFTNTKAQQQRQQQQQRQQAKQQQNGSRPTFWTHCPFCSVKYQYYREVLNKPLRCQHCQKPFIACDANVQGTSPATNSSQQAFNQQKDGLNHDASRVGVESQGNLHAEKSNTGPYEKKGPTNVSQKPNGKRKRNQVAESSQSSDFTSSSGSEDDMFAGGDGFPGVGNHSTYAEEQRRRSSRQKQNVSYKDNVCNEGDDLLRPSKSGHGETTEVKVQNGFAADPSYPTSKAANHPNVYLYPEAEFSDFDKGREKKCFAAGQIWAIYDPTDGMPRFYALISKVLSPEFKLQITWFVPHPDDSDEINWVKAELPVACGKYRLGGTDITEDHLMFSHLVMCGRVSRNIKVYPRKGETWALFKNWDIKWYMHPESNKQYEFEFVEILSDYVEGEGVRVAYLSKLKGFACLFRITKEDSQTFQIPLGELFRFSHRVPSFKMTGQEGVGVHIGSYELDPASLPLNLEGIAVPENFDVKIGQSSSDRDNRSNLAENKDSVDDIDDLLASPASTQGPIEIPDSKFFNFDSRRSLEKFQIGQIWAFYSDEDGLPKYYGQISKIETSPDLELHVHWLTCCWLPEDTIKWEEEDMPISCGRFNVRKSAEFLNVYNDTSSISHQVHADAVVQNKRYAIFPKQGEVWALYRNWSSGIKSSDLKNWEYDIVEVLGETDVFIDVLILEHVPDFSSVFRAKSNLGPSVNLRKISKKELLRFSHQIPGFRLTEEEHGNLRGFWELDPGALPVHYYHV* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1232 902 MobiDBLite consensus disorder prediction 139 191 - -
Lja4g1232 902 Pfam Domain of unknown function (DUF3444) 672 880 IPR024593 -
Lja4g1232 902 Pfam Domain of unknown function (DUF3444) 399 602 IPR024593 -
Lja4g1232 902 PANTHER - 390 901 - -
Lja4g1232 902 MobiDBLite consensus disorder prediction 267 316 - -
Lja4g1232 902 MobiDBLite consensus disorder prediction 122 191 - -
Lja4g1232 902 CDD DnaJ 67 120 IPR001623 -
Lja4g1232 902 Gene3D DnaJ domain 54 148 IPR036869 -
Lja4g1232 902 PANTHER - 1 385 - -
Lja4g1232 902 Coils Coil 167 187 - -
Lja4g1232 902 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lja4g1232 902 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lja4g1232 902 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lja4g1232 902 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Lja4g1232 902 MobiDBLite consensus disorder prediction 263 375 - -
Lja4g1232 902 SMART dnaj_3 66 123 IPR001623 -
Lja4g1232 902 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lja4g1232 902 Pfam DnaJ domain 67 128 IPR001623 -
Lja4g1232 902 MobiDBLite consensus disorder prediction 357 371 - -
Lja4g1232 902 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 390 901 - -
Lja4g1232 902 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1232 Lja-Chr4 10912676 10916163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1232 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.934 1.66e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1232 - - gmx:100795200 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1232 4 10912676 10916163 Lja4g1232 4 10912676 10916163 ECH
Lja4g1232 4 10912676 10916163 Lja6g2804 6 57098532 57103508 PCT