Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1119 ATGTCGGAAGTTTGGCTTTATCTGAAGAAATCACTTCAGTGCAAACCTCATTCTTCAGAAGTTTATGATCCCAAGCCAAGATCCCAAGCAAGCAATGCCATGCTTATGATTAGCCCTATTAGTCATGAAATTGTTCTTGATAGGACAAGTGGAGAGATTAAGATTTGTCCATGTTTTCCTTATTCTCATGGAAATATAGATGGTTCTCTTAGATCTATGAAGCAAACTTTGTGTGTTGATTGTGATGAATGCCATATCTTCTCAAAGCCAAAGGTGCGGAAAGATTTTGCCAGCGATCTTCCAACATTAAATAGTCATCATGAATGTGCAAAGAAACATCAAAAATCTCTTGACACAATTGAGGAACACGATATCCCTGAGCATTCTGTCACCCCACTTCATAGAGATGACTCATCTTGGAAAATTATCGAAAAAATATGCAAAACAATCTATTTCAATTCTGAAAGAAAGGCAGCAGAGCTTGAATGTGTCTTGAAAGTCCATAGCACACAAAAGACATTTGCTTTGTTTGAGAAATGTAGAGAAATGGTGAAGATTAATGCTGAAGAGATGCAAAATGGGCACCCCAGATGCCTGGTTGATGGAAATGAGCTAATGAGGTTTCATGGCACAACTATTGCATGCTCTCTTGGAATAAATGACTCTTCCAGCCTGTGCACTTTAGACCAATGTGGTGTGTGTCAAATTATGAGGTATGGTTTCTCTGCCAAACAAGAATTCAATGGTTTTGTTGGGGTAATCACCAATTCTACATGTGAAAACGCCATTGATTCAATTGGCTCATCTAGTGTACCAATCAATAGAAAATGTGTTATAGTGTGTCGAGTAATAGCTGGGAGAATCAACAACCCCATGCAAGAGATCCAAGAAATTGATGATTCGGGGTATCATTCGTTGGTGAAAAAGATAAATGGCCAATCAGATATTGAAGAGCTCAGTGTTTTGAATCCCAAAGCTGTCCTCCCTTGCTTTGTGGTAATCTACAGATTTTGA 1014 0.3856 MSEVWLYLKKSLQCKPHSSEVYDPKPRSQASNAMLMISPISHEIVLDRTSGEIKICPCFPYSHGNIDGSLRSMKQTLCVDCDECHIFSKPKVRKDFASDLPTLNSHHECAKKHQKSLDTIEEHDIPEHSVTPLHRDDSSWKIIEKICKTIYFNSERKAAELECVLKVHSTQKTFALFEKCREMVKINAEEMQNGHPRCLVDGNELMRFHGTTIACSLGINDSSSLCTLDQCGVCQIMRYGFSAKQEFNGFVGVITNSTCENAIDSIGSSSVPINRKCVIVCRVIAGRINNPMQEIQEIDDSGYHSLVKKINGQSDIEELSVLNPKAVLPCFVVIYRF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1119 337 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 336 - -
Lja4g1119 337 Gene3D - 121 336 - -
Lja4g1119 337 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 336 - -
Lja4g1119 337 SUPERFAMILY ADP-ribosylation 130 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1119 Lja-Chr4 9859876 9862084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1119 26 334 C2H2 Transcription Factor Family AT5G54630 39.130 1.00e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1119 - - cam:105851073 409.453