Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1081 ATGGAATTAATTTCTAGAGAAACCATCACACCATCTACACCCACTCCTTCTCATCTCAGAATTTATCCCCTTTCTTTTATAGATCACATCTTTATAAGAAATTATGCCCCATCACTTTTCTTTTACCAGCCAATCGGGGTTGGACAAGAATGTGACCAAAGATCCATAATATGTGAGCTCAAGAAATCTTTATCTCAAGTTCTAACCAAATACTACCCGTTTGCAGGCAGGTTCAGAGATCAACTTTCTATTGAATGCAACGACCAAGGTGCATCATTTCTTGTCACAATGATCACAGGTGCGAAGCTATCAACAATCCTCCAAAACCCCACTGAAACATTGTTGAGCCCTTTGTTTCCTGATGAATGGGAGCTTATGAGTCCAGGTGGAAGTATCTTAGCCATTCAGATTAGCTGTTTTCCATGTGGAGGTCTGGCAATCAGCGTGTGTATGTCTCACAAAGTTGGCGATGGTAACACTCTTTTTAACTTTGTGAATGATTGGGCCACCATGAATCGAGAAAAAGGAGAGTTGTTATCACTCACACCTTCACTTGATGGTGGAGTTTTAATATTCCCACAAGGGAACTTGCCTATTTTCCCTGAAATCGTGTTTGCGAAAGACAACACGGTAGTGTGTAGAAGGTTTGTTTTCCGAGCCTCGAAAATCAAGTCCCTGAAGGCAATGGTATCTTCTCATGGGGTTCCAAATCCCACTCGCGTTGAAGTTGTCACTGCTTGGATTTACAAGTGTGCAGTTTCTGCGTTGGGGTTAACTTTTAAGACAACATGGATGCAAACAGTAGTCAACCTTCGCAAAATAATGGTTCCTCCATTGCTTGAAAGGTGTGTAGGGAACATGATTTGGTGGTTGGTGCTCAACCCGGTCGTGGACAAGAAGAAGGAAAGAGAACTACCCGAGTTGGTAAGCAAAATAAAAGAAGGGTTAAGTGAATTTCGTGATGTGTATCCAAATAAATTTGGAGGAAATAATAAGGACTTATCATTCATCTCTGAGTGCCTAAAACAAGCAGCTTCAGCGCAGGAGCCTAGTGATTTTGTGAAAAAGAACCAAACATTGTTTATTTTTAGTAGTTGTTGTAAGTTCCCAATGTATGAAACAAACTTTGGGTGGGGCAAACCAATTTGGGTGACTACTAGTGTTATTCCTGGGAAGAATATCATATATCTTATGGATACAAGAGATGGGGACGGAATTGAAGCAATTGTGAGTATGGAAGAGAAAGACATGGCAGTGTTTGAGCGCAATGAGGAGCTACTTCAATATGCTTCTTTGAATCCAAACCGTGAGAAATGTGACTCGCTTCGTTCATTATTATAA 1341 0.4079 MELISRETITPSTPTPSHLRIYPLSFIDHIFIRNYAPSLFFYQPIGVGQECDQRSIICELKKSLSQVLTKYYPFAGRFRDQLSIECNDQGASFLVTMITGAKLSTILQNPTETLLSPLFPDEWELMSPGGSILAIQISCFPCGGLAISVCMSHKVGDGNTLFNFVNDWATMNREKGELLSLTPSLDGGVLIFPQGNLPIFPEIVFAKDNTVVCRRFVFRASKIKSLKAMVSSHGVPNPTRVEVVTAWIYKCAVSALGLTFKTTWMQTVVNLRKIMVPPLLERCVGNMIWWLVLNPVVDKKKERELPELVSKIKEGLSEFRDVYPNKFGGNNKDLSFISECLKQAASAQEPSDFVKKNQTLFIFSSCCKFPMYETNFGWGKPIWVTTSVIPGKNIIYLMDTRDGDGIEAIVSMEEKDMAVFERNEELLQYASLNPNREKCDSLRSLL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1081 446 Gene3D - 208 430 IPR023213 -
Lja4g1081 446 Pfam Transferase family 2 426 - -
Lja4g1081 446 Gene3D - 1 198 IPR023213 -
Lja4g1081 446 PANTHER F21J9.9 3 435 - -
Lja4g1081 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1081 Lja-Chr4 9477955 9479398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1081 25 422 Monolignol Biosynthesis Gene Families AT5G48930 23.557 2.85e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1081 - - lja:Lj4g3v2512860.1 606.675