Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1079 ATGATGAGCGGGGAATCCAATTTATACAAAGGACTGAAACCAGTGATACTAATGGTGTTTGTGCAGGTTGCATATGCTGCAATGAATATCATCTACAAGCTCGCCATAAAGGATGGAATGAACATGCCGGTGGCTAATGCCTACCGCCTCATTTTTGCATCGGCTGTCACTATCCCTCTTGCTTTTATCTTTGATAGGAAGAAGAGGCCAAAAATTACATGGAGGGTACTTTTTTTGGCATTTCTTTGTGGATTGTTTGGGGGAAGTTTATTTCTAAACCTTTATGCCGTGGGTCTGGCTTTGACGTCAGCAACGTTTATGTTGGCCATGGTCAACCTTATTCCAGGCATTACCTTCATCATGGCTACAACCTTCCGATTGGAAAAATTAAATTTCGGAGTACCAGAAGGGAAGGCAAAGGTGATAGGAACATGCGTTGGAATTAGTGGGGCAATGCTCATGACCTTTCTCAAAGGGGTGGAAATTAATATTTTTCCTTCCCAAATTAACCTTTTGCATCCACATCGGGACCAAAATAAGCATATGGGGCAACATCATGTAGACTTTAGTAATAAACTACTTGGGGTTCCAAGTGCCATTGCAAGTTGCTGCTCTTTTTCTTTGTGGTTAATCATTCAGGCTCAAGTGAACAAAGAATTCCCCAGCCATCACTCAAGCTCAGCGTTGATGTGCACAATGGGAGCGATACAATCCATTGTTGTTGCTCTTTGTTTTGAAAGGGATTGGAATCAATGGAAGTTGGGTTACGATATCAGACTTCTAACTGTGGCTTATTCGGGAATTGTGGCCTCTGGTTTGGTAGTCATTATGATTTCCTATTGCGTAAAGATGAGAGGGCCTCTATTTGCATCTATTTTCAATCCTCTACAACTTTTACTTGTCGCTATCGCTGCTTATTTGTTGTTGGATGAGAAGTTATATCTAGGAAGTGTTCTTGGAGCTGGGCTGATCGTGTGTGGCCTATACACTGTGCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGACTCAGTTAATTCCATTGGAAAACACCAAACAACCCGAAGTTACTGAGATTGCTGTTATGTCTATGACCATAGATCATGATAAATGGGTCCATAGCAATCAAAATCAAACTAGTGCAACCTGGAATGTTGCTAATGATCAATAA 1170 0.412 MMSGESNLYKGLKPVILMVFVQVAYAAMNIIYKLAIKDGMNMPVANAYRLIFASAVTIPLAFIFDRKKRPKITWRVLFLAFLCGLFGGSLFLNLYAVGLALTSATFMLAMVNLIPGITFIMATTFRLEKLNFGVPEGKAKVIGTCVGISGAMLMTFLKGVEINIFPSQINLLHPHRDQNKHMGQHHVDFSNKLLGVPSAIASCCSFSLWLIIQAQVNKEFPSHHSSSALMCTMGAIQSIVVALCFERDWNQWKLGYDIRLLTVAYSGIVASGLVVIMISYCVKMRGPLFASIFNPLQLLLVAIAAYLLLDEKLYLGSVLGAGLIVCGLYTVLWGKSKEMKKKTQLIPLENTKQPEVTEIAVMSMTIDHDKWVHSNQNQTSATWNVANDQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1079 389 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 13 355 - -
Lja4g1079 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 337 - -
Lja4g1079 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Lja4g1079 389 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Lja4g1079 389 Pfam EamA-like transporter family 13 155 IPR000620 GO:0016020|GO:0016021
Lja4g1079 389 PANTHER WAT1-RELATED PROTEIN 13 355 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1079 Lja-Chr4 9439076 9442739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1079 12 369 Nodulin-like Gene Family AT1G25270 40.947 2.20e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1079 - - cam:101515687 497.278