Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1074 ATGGCGGTTCTGGATGTCCTTTTCGGAATAGCCAATGTCACATTCTTCTACACAATCTTAATATGGGTTTTGGTTGATAGTTTGAGACAGAGCAAGCTTAACAACAACATTGTATATTCCAAACAATGGCCAACATTTTTCACCACCGTAACTGTTCTCTTTAATGTTGTTATTTCCCTCTTGAACATGGCTTTTGTGTTTCATGAATACACAACTCAGAAAACCATAGGGTATAACTCATTTTCCTTAGCTCTAACATGGGTTTTGGCCACAGTGGTTTCATTTTACTCAATGAGGACTACACTCAGGGAGAACAATAAAAGGTTCCCTCTTGTTCTAATTCTTTGGTGGTTTTTCACCACTCTGACAGAGATTTTCTTAGTGTGTTTGGAGCTAGTGAGAAATGTTGAATCTGTTAATTGGTGGGTTTTCTTGTCAGAGGAGAACATAGTTGGTACTGTTTCTTTGCCTATGTTGTTACTTCTCTGTTGCAATGTGTTTTGTGGAAGGGAAAAAAGTGATGTGGAAGAGCAATTGCTTCAGAAAGAGGTGGAATCTTCAATGGAAATGAATGAACAAGAGGCTTTTACAGAGGCTAGTACATGGAGCAAAGTAACTTTCAGATGGCTGAACCCTATATTCCACAGGGGTAGGGTTCAAAAACTTGAGCTTGGTCACATTCCTTCTGTTCCTCTTCCTGAGACAGCAGAAAGTGCTTGTTCTGTGTTGCAAGAATCACTTCGCAAACAGAAACTTGAAGGGGCTTCATTGACAAAAGCTATTTTCCATTCTGTGTGGAAGCCATTGGCATTTAATGCAGTTTTAGCAGGTGTGAACACTATTGCCTCTTATATTGGTCCATTGTTGATTTCAAGCTTTGTGAATTTTTTACTGGAGAATGATGATAGTTCAAGTATCCAATATGGGATGGTTCTAGCATTCATTTTCTTCCTCTCTAAGACGGTGGAGTCATTGAGTCAAAGACAATGGTACTTTGGGGCTCAACGAATTGGAATTCGGGTGCGTTCAGCTCTTATGACTCTAGTTTATAGCAAGTCTCTATTGATGAAATGTGCTGGACCAACACATGGCAAGATCATTAACTTGATCAATGTGGATGTTGAAAGAATTGGGGACTTTTGTTGGTACATTCATGGGATTTGGTTGCTTCCAGTTCAGGTTATTTTGGCCTTAGTCATCTTGTACATAAATCTTGGTTCTACCGCTTCCTTTGCTGCATTTGCTGTCACGATTTTTGTCATGGTGTGCAACACACCTTTGGCCAATAAGCAAGAAAATTTGCACTCTAAAATCATGGAAGCTAAGGACTCAAGAATAAAAGTGACTTCTGAGACCATGAAGAACATCAGAATCTTGAAAATGCATTCATGGGAATGTAGTTTCTTGCAGAAAATCCTCCAACTTAGGGATAATGAGAGGAGGTGGTTGCAGAGATACCTCTACACATGCTCAGCAATTGCTACTCTATTCTGGGCATCTCCAACTTTGGTTTCTGTTGTCACTTTTGGGGCTTGTATCCTAGTGAAGACAGAGCTAACTGCTGCTAAAGTCCTCTCAGCGTTGGCCACATTTCGTATTTTACAAGAACCAATCTACAACTTACCTGAGCTCATTTCCATGATAACACAAACAAGAGTCTCGGTTGATCGAATCCAGGAATTTGTCAAGGAAGATGATCAAAACCAATTCATGAATAGGGATCCTCCAAAAACTTCAGGATTTGCTATTGAAATCAACCCAGGCGAATATTCATGGGAGACAAATAATCAAACCTTCAAGAAACCGACCATTCAGATTATAGAAAAATTAATGATAAAGAAAGGAAAGAAGGTAGCAGTTTGTGGGTCGGTAGGATCGGGCAAATCAAGTTTGCTATGTTGTATGCTTGGGGAGGTTCCATTAGTCTCTGGGGCCTTAACCAACATCTATGGGAGTAAAAGTTATGTAGCCCAAAGTGCCTGGATACAATCTGGAACTATAAGGAAGAATATATTGTTTGGAAAGAAAATGAATAGAGACTTTTATGAGAATGTTTTGGAGTGTTGTGCTTTGCACCAGGATATCAACTTATGGAGTGATGGAGATTTGACTCTGGTGGAGGAGAGGGGTATAAACTTAAGTGGAGGGCAAAAACAGCGAATTCAACTAGCAAGGGCAGTTTACAATGATTCAGACATTTATTTTCTTGATGATCCTTTTAGTGCGGTCGATGCACATACCGCGACTCATTTGTTTAAGAAATGTCTTTTGGAGCTATTATATGATAAAACAGTTGTGTATGCTACCCATCAGCTGGAATTCTTGGAAGCTGCAGATCTTATTATAGTATTGAAAGATGGGAAAATAGTTGAGTCAGGAGGATACAATGATCTCATAGCACGCCCCAATTGTGAACTTGTTCGACAAATGGCTGCTCATGAAGAAGCAGTAAACCATATAAATCCATGCCAAGAAGATGATTCTGTTGGCTCCAGACCCTGCCAAAAAAATCAAATTGAAGCTGTGGAAGAAAATATTCAAGAGACTATCATGGATTGGAAGAGAACCAAAGAAGAGGAAGCAATGACGGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACTTCCGCTTATAGAGGAGCACTAGTGCCGATCATTCTCCTTTGTCAAGTTCTCTTTCAAGTATTGCAAATGGGAAGCAATTATTGGATTTCTTGGGCAACAGAGGAGCGGGGCAGGGTGAGTAATGGGGAGCTTATGGGAACATTTATTCTTCTGTCTGGTGGCAGCTCCATCTTCATACTAGGAAGGACTGTTTTAATGGCAACAGTTGCCGTCGAGACTGCTCAGCGTCTTTTTCATGGAATGATCTCATCACTTTTCAGGGCACCTGTGTCATTTTTTGACGCCACACCTTCAAGCAGGATTATGAGCAGGTCATCAACGGATCAAAGTACTGTAGATACTGACATACCATTCAGATTAGCTGGACTAGTATTTGCACTCATCCAGTTATTGAGTATCATCATACTAATGTCCCAAGCTGCATGGCAAGTCATTCTTCTCTTTTTTGTGGTTCTTGCTATCTCCATCTGGTATCAGGCTTATTATATCACTACAGCAAGGGAATTAGCCAGGATGGTAGGGATTCGAAAGGCACCAATCTTGCATCACTTCTCTGAATCAATTGCTGGGGCTGCTACGATCCGTTGTTTCAATCAAGAGCAAATATTTTTAACCAAAAAAATGGCTCTAATTGATGATTATTCTCGGGTAGCCTTTCACAATTATGCCACCATGGAATGGTTATCAGTCCGAATCAACTTTCTCTTCAATTTGGTCTTCTATTTTGTTCTTGTCATCTTGGTCACTCTACCGAAGTCTGCCATTGACCCCAGCTTGGCAGGGCTAGTTGCTACTTATGGTTTGAACTTGAACGTGCTTCAGGCTTGGGTGATTTGGAATCTTTGCAATGTTGAAAACAAAATGATATCTGTTGAGAGAGTATTGCAATTCTCTAACATACCAAGTGAAGCACCATTAATTATTGAAGATTGTAGGCCTGAACCAGAGTGGCCTGGGGATGGAAAAATTGAACTCCATAACCTTCATGTACAGTATGATCCTGCTGCTCCTATGGTTCTCAAAGGTGTAACTTGCGTCTTCCCAGGACGAAAGAAAATTGGAGTTGTAGGCAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCCCTATTTCGAGTGGTGGAGCCTTTGGAAGGGTGCATACTCATTGATGGTGTAGATATTTCCAAGATTGGTCTGCAAGATTTAAGATCTAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTCTAGGTACCGTAAGGACGAACTTGGATCCTCTGGAACAACATACAGATCAAGAACTTTGGGAGGTTCTAAGCAAATGCCATCTTGCCGAAATAGTAAAGCAAGATCCAAGGCTTCTTCATGCACCAGTGGCTGAAAATGGAGAAAATTGGAGTGTCGGACAAAGACAGCTAGTTTGCCTTGCTAGGTTGCTACTGAAGAAAAGAAAAATTTTGGTGCTTGATGAGGCAACTGCATCGATAGACACTGCAACTGATAATTTAATTCAGAAGACTATCAGGGAAGAAACAAGCGGATGCACTGTCATTACTGTGGCACACAGAATTCCTACAGTCATTGATAATGATTTGGTGTTGGTCCTTGATGAAGGGACAATTGCTGAGTATGATCAACCATCTCAATTGTTACTGAACAATTCTTCTTCATTCTCGAAGTTGGTTTCAGAATTTGTGAGGAGATCATCCCAAAGTAACTGCCACAAAGGATAA 4344 0.4072 MAVLDVLFGIANVTFFYTILIWVLVDSLRQSKLNNNIVYSKQWPTFFTTVTVLFNVVISLLNMAFVFHEYTTQKTIGYNSFSLALTWVLATVVSFYSMRTTLRENNKRFPLVLILWWFFTTLTEIFLVCLELVRNVESVNWWVFLSEENIVGTVSLPMLLLLCCNVFCGREKSDVEEQLLQKEVESSMEMNEQEAFTEASTWSKVTFRWLNPIFHRGRVQKLELGHIPSVPLPETAESACSVLQESLRKQKLEGASLTKAIFHSVWKPLAFNAVLAGVNTIASYIGPLLISSFVNFLLENDDSSSIQYGMVLAFIFFLSKTVESLSQRQWYFGAQRIGIRVRSALMTLVYSKSLLMKCAGPTHGKIINLINVDVERIGDFCWYIHGIWLLPVQVILALVILYINLGSTASFAAFAVTIFVMVCNTPLANKQENLHSKIMEAKDSRIKVTSETMKNIRILKMHSWECSFLQKILQLRDNERRWLQRYLYTCSAIATLFWASPTLVSVVTFGACILVKTELTAAKVLSALATFRILQEPIYNLPELISMITQTRVSVDRIQEFVKEDDQNQFMNRDPPKTSGFAIEINPGEYSWETNNQTFKKPTIQIIEKLMIKKGKKVAVCGSVGSGKSSLLCCMLGEVPLVSGALTNIYGSKSYVAQSAWIQSGTIRKNILFGKKMNRDFYENVLECCALHQDINLWSDGDLTLVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTATHLFKKCLLELLYDKTVVYATHQLEFLEAADLIIVLKDGKIVESGGYNDLIARPNCELVRQMAAHEEAVNHINPCQEDDSVGSRPCQKNQIEAVEENIQETIMDWKRTKEEEAMTGRVKWSVYSTFVTSAYRGALVPIILLCQVLFQVLQMGSNYWISWATEERGRVSNGELMGTFILLSGGSSIFILGRTVLMATVAVETAQRLFHGMISSLFRAPVSFFDATPSSRIMSRSSTDQSTVDTDIPFRLAGLVFALIQLLSIIILMSQAAWQVILLFFVVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQIFLTKKMALIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPKSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERVLQFSNIPSEAPLIIEDCRPEPEWPGDGKIELHNLHVQYDPAAPMVLKGVTCVFPGRKKIGVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVDISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHTDQELWEVLSKCHLAEIVKQDPRLLHAPVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLDEGTIAEYDQPSQLLLNNSSSFSKLVSEFVRRSSQSNCHKG* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1074 1447 CDD ABCC_MRP_domain2 1197 1417 - -
Lja4g1074 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 583 811 IPR003439 GO:0005524
Lja4g1074 1447 SUPERFAMILY ABC transporter transmembrane region 262 563 IPR036640 GO:0005524|GO:0016021
Lja4g1074 1447 Gene3D - 1182 1435 IPR027417 -
Lja4g1074 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1191 1425 IPR027417 -
Lja4g1074 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 802 IPR027417 -
Lja4g1074 1447 Pfam ABC transporter 1217 1364 IPR003439 GO:0005524
Lja4g1074 1447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 886 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja4g1074 1447 CDD ABCC_MRP_domain1 583 788 - -
Lja4g1074 1447 Pfam ABC transporter 610 740 IPR003439 GO:0005524
Lja4g1074 1447 CDD ABC_6TM_ABCC_D2 884 1174 IPR044726 GO:0140359
Lja4g1074 1447 CDD ABC_6TM_ABCC_D1 271 558 IPR044746 GO:0140359
Lja4g1074 1447 Gene3D - 561 827 IPR027417 -
Lja4g1074 1447 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 110 1442 - -
Lja4g1074 1447 Gene3D ABC transporter type 1, transmembrane domain 257 560 IPR036640 GO:0005524|GO:0016021
Lja4g1074 1447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 273 550 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja4g1074 1447 SMART AAA_5 614 788 IPR003593 -
Lja4g1074 1447 SMART AAA_5 1225 1408 IPR003593 -
Lja4g1074 1447 PANTHER OS01G0902100 PROTEIN 110 1442 - -
Lja4g1074 1447 Gene3D ABC transporter type 1, transmembrane domain 849 1180 IPR036640 GO:0005524|GO:0016021
Lja4g1074 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1199 1433 IPR003439 GO:0005524
Lja4g1074 1447 SUPERFAMILY ABC transporter transmembrane region 884 1179 IPR036640 GO:0005524|GO:0016021
Lja4g1074 1447 Pfam ABC transporter transmembrane region 272 537 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja4g1074 1447 Pfam ABC transporter transmembrane region 890 1128 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja4g1074 1447 ProSitePatterns ABC transporters family signature. 713 727 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1074 Lja-Chr4 9368407 9376688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1074 601 837 Calmodulin-binding Proteins AT2G36910 29.771 1.80e-20 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1074 - - gmx:100809063 2308.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1074 4 9368407 9376688 Lja4g1074 4 9368407 9376688 ECH