Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1073 ATGAATTGGGATTTTTTCTCGATCAATCAGCTGGATCCGACCTTATTTCTAGGTACCGTAAGGACAGACTTGGATCCTCTGGAACAACATACAAATCAAGAACTTTGGGAGGTTCTTAGAAAATGCCATCTCGCAGAACTAGTAAGGCAGGATCCAAGGCGTCTTGATGCACCAGTGGTTGAGAACGGGGAAAACTGGAGTGTTGGACAAAGACAGCTAGTTTGCCTAGCCAGGTTGCTGCTTAAGAAACGAAAAATTCTGGTCCTTGATGAGGCAACGGCGTCCATTGACACTGCAACTGATTGTTTAATTCATAAGACTATCAGGGAAGAAACAGAAGGATGCACAGTCATTACTGTAGCACACCGAATTCCAACTGTGATTGATAATGATTTTGTGTTGGTCCTTGACCAAGGGAGAATTGTGGAGTATGGCCAACCCAATCAATTGCTAAAGAACGGTTCTTCTGCATTCTCCAAGTTGGTGTCTGAGTTTTCCACAGCATCCCAGAAAAAATGA 519 0.4355 MNWDFFSINQLDPTLFLGTVRTDLDPLEQHTNQELWEVLRKCHLAELVRQDPRRLDAPVVENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDCLIHKTIREETEGCTVITVAHRIPTVIDNDFVLVLDQGRIVEYGQPNQLLKNGSSAFSKLVSEFSTASQKK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1073 172 Pfam ABC transporter 14 94 IPR003439 GO:0005524
Lja4g1073 172 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 6 170 - -
Lja4g1073 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 155 IPR027417 -
Lja4g1073 172 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 6 170 - -
Lja4g1073 172 Gene3D - 5 165 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1073 Lja-Chr4 9334735 9336521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1073 12 162 Calmodulin-binding Proteins AT2G36910 30.719 5.89e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1073 - - gmx:100809063 243.432