Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1051 ATGGAGGGATCAAGTTCAAAACACAGCAAGAACATCCTCAAAACTCCAGCACTTCTTCAGTACATCCTTGAAACGAGTAGCTATCCGAAAGAACACGAGCAATTGAAGCAACTCAGAGAGGCAACGGCACTGAAATACGGATTCTGGAGTGTAATGAATGTGCCGTTGGATGAAGCCCAGTTCATATCTATTCTTCTAAAGGTCATGAATGCCAAAAAAACACTGGAAATTGGAGTCTTCACTGGTTATTCTCTTCTCACTACAGCTCTTGCTATTCCTTCTGATGGCAAGGTAACAGCAATTGATGTGAATAAAGAAGCGTACGAGACTGGGTTGCCTTTCATTCAGAAGGCAGGAGTGGAGCACAAAATTGACTTTATCCATGGGGATGCATTATCAGCTCTCAACGATCTTGTTGATGCAAAACATGAAGAATCATTTGATTATGCATTTGTGGACGCTGAAAAGGAAAACTTCATCAAGTATCACGAGGTGTTATTGAAATTGGTGAAGAAGGGTGGGATAATTGCATATGACAATACCTTATGGGCTGGTTCTGTGGCCATGTCTGAGGAGGATGAGATAGAAGATATAATAAGGCCAAAAAGGAAGCATGCAATTGAATTCAACACCTACATAGCAAATGATACTCACGTGGAATCAACAATCCTCTCTGTTGGAGACGGTGTAACCCTCTGTCGTCGTCTCTAA 711 0.4177 MEGSSSKHSKNILKTPALLQYILETSSYPKEHEQLKQLREATALKYGFWSVMNVPLDEAQFISILLKVMNAKKTLEIGVFTGYSLLTTALAIPSDGKVTAIDVNKEAYETGLPFIQKAGVEHKIDFIHGDALSALNDLVDAKHEESFDYAFVDAEKENFIKYHEVLLKLVKKGGIIAYDNTLWAGSVAMSEEDEIEDIIRPKRKHAIEFNTYIANDTHVESTILSVGDGVTLCRRL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1051 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 235 IPR029063 -
Lja4g1051 236 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 11 236 IPR002935 GO:0008171
Lja4g1051 236 PANTHER O-METHYLTRANSFERASE-RELATED 7 236 - -
Lja4g1051 236 Gene3D Vaccinia Virus protein VP39 3 236 IPR029063 -
Lja4g1051 236 CDD AdoMet_MTases 75 178 - -
Lja4g1051 236 Pfam O-methyltransferase 24 236 IPR002935 GO:0008171
Lja4g1051 236 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 7 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1051 Lja-Chr4 9013605 9018093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1051 10 236 Monolignol Biosynthesis Gene Families AT1G67990 55.066 6.23e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1051 K00588 K13272 gmx:100813350 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1051 4 9013605 9018093 Lja4g1051 4 9013605 9018093 ECH