Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1050 ATGAAGATGAAGCCCACGGCAACAATATTCCCCTCGCTCCTACTTCTTTGTCTTGGTCTTGGAATAACAACATTTCAAAGCACCCTCTCTTGGCCACTTGACACTCTCCTTATTATTTCCACCACCCTCCTTGCTCTTTCACTAAACTACTGGCTTGTCCCTGGAGGCTTTGCATGGAGGAACTATCACCACCAATACAACACAAAGCTCAATGGGCCCATGGGCTGGCCCGTGTTAGGGACTTTGCCTCAGATGGGCTCTATGCTGGCCCACGCAAAACTCGCCAACTTAGCCACTTCCCTGAACACAAAGAGGCTAATGGCTCTGAGTCTTGGTGCCACCCCGGTTGTGATAAGCAGTCATCCTGATACCGCCAGGGAAATCCTTCTGGGCTCCTCCTTCTCTGACCGTCCGGTGAAAGAATCAGCACGCGCACTCATGTTTGAGCGCGCCATTGGATTCGCTCCTTCCGGGACATACTGGCGCCACCTTCGCAGGGTGGCGTCTTTCCACATGTTCTCTCCGAGGACGATCCTCGGTTTGGAGAGTCTCCGGCGGCGTGTGGCGGATGAAATGGTGGCAAAGACATGGAAGGAGATGGAGGTGAAAGGGGTGGTAGAGGTTAGAGGGGTGTTGAAGGAAGGGTCTCTTTGCAATATTTTGGAGAGTGTCTTTGGTCTTGTCGACGATAATAATAACAATGGTTGTGTGAGTGAGGAGTTGGGGAAGATGATTAAGGAAGGTTATGAGTTGATTTCGGAATTTAACTTGGAAGATTATTTTCCTTTGAAGTTCCTGGACTTTCATGGGGTGAAGAGAAGGTGTCATAAATTGGCGGCTAAGGTTACTAGTGTGGTGGGTGAGATTGTGGAAGAGAGAAAAAGGGCCATGGAGATGTTCGTGGGGCAGAATGATTTTCTTGGCGCTTTGCTTTCTTTGCCCAAAGAGGAAAGGCTGGATCATTCAGATATGGTGGCTGTTCTGTGGGAAATGATATTTAGAGGAACAGACACAGTTGCTATACTCTTGGAATGGATCATGGCGAGGATGGTCTTACATCAAGATATACAAATGAAAGTCCGCCAAGAGATTGACACGTGCATCGGCCAAAACAAGCATGTGCGAGACTTGGACATTGCAAATCTCCCTTACTTGCAGGCTGTAGTTAAGGAGGTTCTTCGATTACACCCGCCGGGCCCATTGCTATCTTGGGCCCGCCTAGCTGTCCATGATGTCCATGTGGATAAGATCCTCGTGCCAGCTGGCACAACAGCAATGGTTAACATGTGGGCTATATGTCATGACTCGTTTGTCTGGGAGGACCCATGGGCTTTCAAGCCCGAGCGTTTTCTCAAAAAAGATGTGTCTATCATGGGATCAGACTTGAGACTAGCACCGTTCGGCGCGGGTCGTAGGGTGTGCCCGGGGAGGGCCCTAGGCTTAGCCACGATCCATTTGTGGTTGGCACAACTTCTCCATAAGTTCATATGGCTTCCAACACAACATGTGGATCTTTCTGAATGCCTTCGGCTTTCTCTCGAAATGAAGACTCCTTTACGATGTCGTGTGGTTCGTAGATAA 1581 0.494 MKMKPTATIFPSLLLLCLGLGITTFQSTLSWPLDTLLIISTTLLALSLNYWLVPGGFAWRNYHHQYNTKLNGPMGWPVLGTLPQMGSMLAHAKLANLATSLNTKRLMALSLGATPVVISSHPDTAREILLGSSFSDRPVKESARALMFERAIGFAPSGTYWRHLRRVASFHMFSPRTILGLESLRRRVADEMVAKTWKEMEVKGVVEVRGVLKEGSLCNILESVFGLVDDNNNNGCVSEELGKMIKEGYELISEFNLEDYFPLKFLDFHGVKRRCHKLAAKVTSVVGEIVEERKRAMEMFVGQNDFLGALLSLPKEERLDHSDMVAVLWEMIFRGTDTVAILLEWIMARMVLHQDIQMKVRQEIDTCIGQNKHVRDLDIANLPYLQAVVKEVLRLHPPGPLLSWARLAVHDVHVDKILVPAGTTAMVNMWAICHDSFVWEDPWAFKPERFLKKDVSIMGSDLRLAPFGAGRRVCPGRALGLATIHLWLAQLLHKFIWLPTQHVDLSECLRLSLEMKTPLRCRVVRR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1050 526 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 12 526 - -
Lja4g1050 526 SUPERFAMILY Cytochrome P450 72 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 Pfam Cytochrome P450 72 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Lja4g1050 526 Gene3D Cytochrome P450 62 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1050 526 PANTHER CYTOCHROME P450 78A7-RELATED 12 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1050 Lja-Chr4 8996587 8999255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1050 30 526 Cytochrome P450 AT1G74110 50.096 3.67e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1050 - - gmx:100817944 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1050 4 8996587 8999255 Lja4g1050 4 8996587 8999255 ECH