LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g1031	ATGTGGTTTCCCGCCATTTTGTGCCCCAGGGCCCAATTATTTGGCGCGGTGATTCAGAAACTGGGAAAGCAGCTCAAACGCGCACAATTTTGGTTTCGCCGCCGCACGAGAAGAACCAAAATCGCGATGGAAATAGTTCGACCTCAGAGTCACCGGAACTCCTTGTCCTCCGCCAACGATGCCGCCGTTGCTGTTCCGACCATTCCCTCATATCGCTCTGCTCCCCCACTCGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGCATGTCAAGGGGAAAGAAACAGGAAGAAATGGAAAAATTGGTAAAAGACCTTTGGAGAGTGAATATGAGACATCAACATGCATCTGAGGTTCTGAACAAAGATATTATATCTCATTTTGTTCTACGTCTCGTGTATTGCAGAACGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAATGTGCTCTCTTCCGCTACCGTTTTCGTTCTCTAACTGCGGAAGCTCAGAGGGCAGTCATGGAGGAATTCGACCTTTCTGGCAGTGCCGTTACCAAAATGGAATTTCAGGATATAAAAGAGAAATTGAGACAAGTTGCACGTTCCATGGGCCCGCCTTTACCCACTCTTGATGCTATCTTCTACAAGGTACCTTTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAAAGTGTTTATAAAACAAGGATATGCATATGTTGCAATGAATCAGGTTGTTTCATTTGTAGCCACACTATTTCGAAGTCAGCTGTCAAAGACACTCATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAACAAGAGAAGCATAGGTTGACTCCTATTGTGGAAGCTCTGTGCTCAAGTTACCTGGGTCCTGATCTTTCTCAGCCAAGAGAATATGCTGAGATATCATTGAAGGACATTGATCAAATTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAAGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGCTTGAACCTGGATGATGCACTTGCATTTTGGAGAGCTGAGTTTTCTAAAAAGGTTGGTTTGGAAAAGTTTGAGAAAGAATATGCATATAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACGGATTATACTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGTGCTGGAGATCAGCATGGTTGCCCCTATAGACATTTCAGTGAAGAGAATCTAAAAGCTGCACTCAGCAGAATGGGGGTGAACAGTCGAGCAATGGAAGATGTAATAGACAAAGTGCGAAATAGACATTATCAGTTAGCTTGCACCTTGACATTTGAAGCCCTTCACGGCGTACCATGTGATGCAGGGATTAACCATCCAAATCAATACTTTATTGACAGTCAAAAGATATTGCAACCAAAGAAGGATTCTTCAGCCTGA	1503	0.4391	MWFPAILCPRAQLFGAVIQKLGKQLKRAQFWFRRRTRRTKIAMEIVRPQSHRNSLSSANDAAVAVPTIPSYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMSRGKKQEEMEKLVKDLWRVNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMECALFRYRFRSLTAEAQRAVMEEFDLSGSAVTKMEFQDIKEKLRQVARSMGPPLPTLDAIFYKVPFEEVPELVAGRKVFIKQGYAYVAMNQVVSFVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDLSQPREYAEISLKDIDQIAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKEYAYNIRHNYGKEGKRTDYTPYSCQKVISSTPGAGDQHGCPYRHFSEENLKAALSRMGVNSRAMEDVIDKVRNRHYQLACTLTFEALHGVPCDAGINHPNQYFIDSQKILQPKKDSSA*	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja4g1031	500	PANTHER	DNA PRIMASE LARGE SUBUNIT	56	496	IPR007238	GO:0006269
	Lja4g1031	500	PANTHER	DNA PRIMASE LARGE SUBUNIT	56	496	-	-
	Lja4g1031	500	PIRSF	DNA_primase_large	34	500	IPR016558	-
	Lja4g1031	500	Gene3D	-	35	293	-	-
	Lja4g1031	500	Pfam	Eukaryotic and archaeal DNA primase, large subunit	220	485	IPR007238	GO:0006269
	Lja4g1031	500	CDD	PriL_PriS_Eukaryotic	71	488	IPR016558	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja4g1031	43	495	Core DNA Replication Machinery Family	AT1G67320	64.417	0.0	650

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja4g1031	K02685		-	gmx:100806321	818.15

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g1031	4	8785135	8794276	Lja4g1031	4	8785135	8794276	ECH