Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1030 ATGTTGAAGAAGAGCCTAATCCTTCAACAGAACTGTCTCCAACACGAGAATCAAGTCGATAGTGGCCATGGTGCAAACTTGGGTGTGCAGTTAGCAAATTGCAATAGTTGCGTGGAGGAAAGCCAATTATGCAAGTGTGATCACATCAATAATATTGAAGAGAGTGCAGTAGCAAGGGACACCAACGTAGATGCAGAGCATGATGCTAAAGCCAATAGTTCTTTAGCTCATTCGGTCATGAATATGGTGGGGATGCTCATAGGTCTTGGGCAATTATCAACTCCATATGCTGTAGAACAAGGAGGCTGGGCATCTGCAATTTTGCTTATAGCACTTGGTGTGATGTGCACTTACACTTGTCATTTACTTGGGAAATGTCTAAAAAAGAACCCCAAGTTAAGAAGCTATGTGGACATTGGGAACCATGCATTTGGAGCAAAAGGAAGATTCCTAGCTGCAATACTCATCTACATGGACATCTTCATGTCCCTTGTTTCCTACACCATCTCATTGCATGACAACTTGACCACAGTGTTGCATTTGAAGCAGTTGCATTTGGCTAAGTTATCTGCTCCACAGATTCTAACTGTGGGTGCAGTGTTGGTTGCTCTACCTAGCTTGTGGCTCAGAGACCTGTCGTCCATTTCTTTCCTTTCAAGTGTTGGCGTTCTCATGTCTGTTGTCATTTTTGTGTCTGTAGCAGCCACTGCAGTTTTTGGAGGTGTGAGGGTTAATCATGAAATACCCTTCCTCCGGCTCCACAACATTCCATCAATATCTGGCATTTACATCTTCAGTTATGGAGGGCACATTGTTTTCCCCAATTTATATAAGGCCATGAAAGACCCCTCAAAGTTTACCAAGGTTTCTATTCTGAGTTTCACAACAGTTACTGCACTTTACACCATAATGGGGTACATGGGTGCAAAAATGTTTGGACCTGAAGTCAATTCACAAGTAACTCTCAGCATGCCCTCAAAGCAAATTGTGACAAAGATTGCTTTATGGGCAACCGTGCTCACACCTATGACCAAATATGCACTAGAATTTGCACCGGTCGCCATTCAGCTAGAGCATAAGCTTCCTAGTTCCATGAGTGGCAGAACCAAAATGATACTCAGGGGGATCATAGGTTCATCTTTACTTTTAGTTATACTAGCCCTTGCTCTGACAGTGCCTTATTTTGAGCATGTTCTCAGCCTCACTGGTTCCCTTGTTAGTGTTGCTATCTCTCTGATTTTCCCTTGTGCTTTCTACATAAAGATTTGTAGGGGACAAATATCAAAGCCTCTATTTGTCCTGAACATTTCTATCATCACATTTGGGTTTCTTCTAGGGGTGGTGGGCACCATTTCCAGCTCAAAATTACTAGTGGAAAAAATTCTAGCAGCTTAA 1395 0.4258 MLKKSLILQQNCLQHENQVDSGHGANLGVQLANCNSCVEESQLCKCDHINNIEESAVARDTNVDAEHDAKANSSLAHSVMNMVGMLIGLGQLSTPYAVEQGGWASAILLIALGVMCTYTCHLLGKCLKKNPKLRSYVDIGNHAFGAKGRFLAAILIYMDIFMSLVSYTISLHDNLTTVLHLKQLHLAKLSAPQILTVGAVLVALPSLWLRDLSSISFLSSVGVLMSVVIFVSVAATAVFGGVRVNHEIPFLRLHNIPSISGIYIFSYGGHIVFPNLYKAMKDPSKFTKVSILSFTTVTALYTIMGYMGAKMFGPEVNSQVTLSMPSKQIVTKIALWATVLTPMTKYALEFAPVAIQLEHKLPSSMSGRTKMILRGIIGSSLLLVILALALTVPYFEHVLSLTGSLVSVAISLIFPCAFYIKICRGQISKPLFVLNISIITFGFLLGVVGTISSSKLLVEKILAA* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1030 464 PANTHER OS05G0424000 PROTEIN-RELATED 19 462 - -
Lja4g1030 464 Pfam Transmembrane amino acid transporter protein 72 451 IPR013057 -
Lja4g1030 464 PANTHER AMINO ACID TRANSPORTER AVT1H 19 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1030 Lja-Chr4 8781079 8783460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1030 34 462 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.606 3.59e-177 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1030 - - lja:Lj4g3v2573860.1 766.533