Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1003 ATGGATAACAATTCAAGAAACTGGAGATGTGCAGAAAAGGGCCAATTGCTTGCTATTTGTGCTCTTCTTTTACTGCAAAACTTTCTGGTCTTCTCTCAGAAATTTGCAGAAACAACAAGCTCAGTGCATATTGTATACATGGGAGATAAGATGTACCATAATCCAGAAAGTACTAAAAAGTATCACCACCAAATGTTATCTTCACTCCTAGGAAGCAAAGAAGCTGCAAAGAGTTCCATTCTTTATAGCTATAAGCATGGATTTTCAGGGTTTGCTGCAAGATTGACAAAATCTCAAGCAGAGGAAATAGAAAAGTGTCCCGGGGTTGTTTCTGTGATTCCAAACCGCATTCACCGACTCCATACAACCAGAAGCTGGGACTTCATAGGGATTCATCATTCCTCCTCAAAAACTGTTTTCACTGGAAGCAACTTAGGTGAAGGAACCATCATAGGTGTTATAGACACAGGGATATGGCCAGAGTCTTCAAGTTTCAATGATGAAGCAATGGGAGAAATCCCATCAAGGTGGAAAGGAGCTTGTCAAGTGGGAGAGAACTTCAACTCCACCAACTGCAACAAGAAGATAATAGGTGCCAGATGGTTCTTGAAAGGAATGCATGATCATACTAAGAAGCTCATCCATGGAAATGGCACTAGTGAATATCTTTCAGCTCGCGATGCTATTGGCCATGGAACACATACAGCTTCAACAGCCGCAGGGTATTTTGTAGGGGATGCAAATTACAGAGGACTTGCATCTGGTTTAGCCAGAGGAGGAGCACCTTTGGCTCACTTAGCTATCTACAAGGTTTGTTGGGACATTTCTGTTGGATCTTGCAGTGATGCTGATATCCTGAAAGCATTTGACATGGCTATACATGATGGGGTGGATGTCTTAACTGTTTCTCTTGGGGTTGGCATTCCTGTGTTTTCCTATGTTGATCAAAGAGACACAATAGCAATTGGTTCCTTCCATGCAACTGCAAAAGGAATCACAGTTGTCTGTTCAGCTGGGAATTCTGGCCCCATGTCTCAGACCGTTACAAACACTGCACCTTGGATCATTGCAGTTGCAGCTACCACAATAGACAGGGTCTTCACAGCAGCCATTACACTTGGAAATAACCTAACTGTGTGGGGACAATCCATTGATGCTGTAAAACATAACCTTGGAACTGTTGGCCTAACATACTCCGAAAGAGTTGCTCTTGACCCATCTGATTATTTAGCCAAGGATTGTCAGTCTGGAAGTCTGAATGAAACATTGGCAGCAGGCAAAATTGTTCTATGCTTTTCAGTATCAAATCAACAGGATATTGTTTCGGCATCACTTGCTGTGAAGGAAGCTGGAGGAGTTGGACTCATCTATGCACAATATCATGATGATGGACTCAATCAATGTGGTTTGATTCCATGTATCAAGGTAGATTATGAAGTGGGGACACAATTATTAACTTATATTAGAAGATCAAGGTTTCCAACTGCAAGTCTAAGTTTTCCAAAGACTGTGATTGGAAAATGGGTATCTCCGCGAGTTGCATCTTTCTCATCTAGAGGACCTAGTAGCATGTCCCCGACGGTGCTTAAGCCTGACATAGCTGCACCAGGTGTGGACATTTTGGCTGCATTTCCACCAGAGGGCACTTCAAAGAGCAGTGGATTTGCATTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTAGCAGGAATAGCAGCTCTCATCAAATCCAAACACCCAACTTGGTCACCTGCTGCCATAAGATCAGCTTTGGTAACAACAGCCTCCCAAACTGGAACTGATGGAGGCTTAATATCTGAAGAGGGTTCCACACCGAAGTCAGCAGATCCATTTGATATTGGGGGAGGGCATGTGAATCCCAACAAAGCAATGGATCCAGGACTCATATATAATATCACCACTGAGGATTATATCCAATTCCTATGTTCCATGGGTCACAATAGTGCATCCATTAGCAAAGTGACCAAGACCACCACAAGTTGTAAGAAAGAAGAACACCAAGCACTGAACCTTAACATTCCCTCCATATCAGTTCCAAACCTGAAGAGGGCTACAACAGTGATGAGAACAGTGACAAACGTGGGAAACATAACTGCATTGTACAAAGCTCTAGTGAAGGCTCCTTATGGCATAAAAGTGAGAGTTGAACCTCAAATTTTGTGTTTCAATTCAGAAATCAGAGTGCTTACCTTCAATGTCAGTTTCAATTCAACTCAAAAATTGCATAGTGGTTACAGATTTGGGAGCCTAACATGGACAGATGGCAAGCATTTTGTGAGGACCCCAATAGTTGTGAGGACATTACAATTTGAATTATAA 2340 0.4239 MDNNSRNWRCAEKGQLLAICALLLLQNFLVFSQKFAETTSSVHIVYMGDKMYHNPESTKKYHHQMLSSLLGSKEAAKSSILYSYKHGFSGFAARLTKSQAEEIEKCPGVVSVIPNRIHRLHTTRSWDFIGIHHSSSKTVFTGSNLGEGTIIGVIDTGIWPESSSFNDEAMGEIPSRWKGACQVGENFNSTNCNKKIIGARWFLKGMHDHTKKLIHGNGTSEYLSARDAIGHGTHTASTAAGYFVGDANYRGLASGLARGGAPLAHLAIYKVCWDISVGSCSDADILKAFDMAIHDGVDVLTVSLGVGIPVFSYVDQRDTIAIGSFHATAKGITVVCSAGNSGPMSQTVTNTAPWIIAVAATTIDRVFTAAITLGNNLTVWGQSIDAVKHNLGTVGLTYSERVALDPSDYLAKDCQSGSLNETLAAGKIVLCFSVSNQQDIVSASLAVKEAGGVGLIYAQYHDDGLNQCGLIPCIKVDYEVGTQLLTYIRRSRFPTASLSFPKTVIGKWVSPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPPEGTSKSSGFAFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQTGTDGGLISEEGSTPKSADPFDIGGGHVNPNKAMDPGLIYNITTEDYIQFLCSMGHNSASISKVTKTTTSCKKEEHQALNLNIPSISVPNLKRATTVMRTVTNVGNITALYKALVKAPYGIKVRVEPQILCFNSEIRVLTFNVSFNSTQKLHSGYRFGSLTWTDGKHFVRTPIVVRTLQFEL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1003 779 Gene3D - 364 505 - -
Lja4g1003 779 SUPERFAMILY Subtilisin-like 44 658 IPR036852 GO:0004252|GO:0006508
Lja4g1003 779 CDD PA_subtilisin_like 371 498 - -
Lja4g1003 779 Pfam Fibronectin type-III domain 677 772 IPR041469 -
Lja4g1003 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 121 IPR037045 -
Lja4g1003 779 Gene3D - 648 775 - -
Lja4g1003 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Lja4g1003 779 ProSiteProfiles Serine proteases, subtilase domain profile. 125 631 - -
Lja4g1003 779 Pfam Subtilase family 146 598 IPR000209 GO:0006508|GO:0008236
Lja4g1003 779 CDD Peptidases_S8_3 118 596 IPR034197 -
Lja4g1003 779 Pfam Peptidase inhibitor I9 42 121 IPR010259 -
Lja4g1003 779 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Lja4g1003 779 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Lja4g1003 779 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
Lja4g1003 779 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 23 776 - -
Lja4g1003 779 PANTHER PEPTIDASE S8 23 776 - -
Lja4g1003 779 Gene3D Peptidase S8/S53 domain 148 644 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1003 Lja-Chr4 8533894 8537687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1003 36 774 Subtilisin-like Serine Gene Family AT1G32960 51.275 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1003 - - gmx:100792709 1303.12