Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0937 ATGTCTTCTGCAGTAATCTGTGAGATCCTCCTATCTGGCTTAACAATCAACTCAACCCTCAGGCGCAGAACCCACTTGGTGCAATCTTTCTCTGTTGTTTTCCTCCACTGGTTCTACAACTCTGCCTCTGGTTCTGAGGGAGATCATCATGTCATGGATCAGAAGAAGAGGAAGAGAATGCAGTCCAATAGGGAATCTGCAAGAAGATCAAGGATGAGGAAGCAGGAACACTTGGAGGGTATGAGTGCCCAAGTGGAACAGCTCAAGAAGGAGAACAACCAGATCAGCACAAACATAGGGGTAACAACCCAGATGTACCTGAATGTTGAGGCTGAGAATGCAATCCTCAGGGTTCAGATGGCAGAACTCAGCAACAGGTTGCAGTCCCTAAATGAGATCATACATTACATTGAATCAAGCAACAACTACCTCTTTCATGAGGCTCAGGAGACTCAGTTCAATGATTGTGGCTTTATGGACACATGGAATTCTCTGGCTGTCAATCAATCAATCATGGCCGCTGCTGACATGTTAATGTATTGA 543 0.453 MSSAVICEILLSGLTINSTLRRRTHLVQSFSVVFLHWFYNSASGSEGDHHVMDQKKRKRMQSNRESARRSRMRKQEHLEGMSAQVEQLKKENNQISTNIGVTTQMYLNVEAENAILRVQMAELSNRLQSLNEIIHYIESSNNYLFHEAQETQFNDCGFMDTWNSLAVNQSIMAAADMLMY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0937 180 Gene3D - 53 108 - -
Lja4g0937 180 Pfam bZIP transcription factor 55 106 IPR004827 GO:0003700|GO:0006355
Lja4g0937 180 CDD bZIP_plant_GBF1 56 106 IPR045314 GO:0003700|GO:0006355
Lja4g0937 180 SUPERFAMILY Leucine zipper domain 55 108 IPR046347 GO:0003700|GO:0006355
Lja4g0937 180 MobiDBLite consensus disorder prediction 48 77 - -
Lja4g0937 180 MobiDBLite consensus disorder prediction 45 77 - -
Lja4g0937 180 Coils Coil 106 133 - -
Lja4g0937 180 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 42 179 - -
Lja4g0937 180 Coils Coil 71 98 - -
Lja4g0937 180 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 58 73 IPR004827 GO:0003700|GO:0006355
Lja4g0937 180 PANTHER BZIP TRANSCRIPTION FACTOR 44 42 179 - -
Lja4g0937 180 SMART brlzneu 51 115 IPR004827 GO:0003700|GO:0006355
Lja4g0937 180 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 53 99 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0937 Lja-Chr4 7965853 7966632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0937 51 180 bZIP Transcription Factor Family AT4G34590 48.951 1.01e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja4g0937 bZIP_1 4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0937 K25786 - gmx:778139 184.882