Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0930 ATGGCGTCCACCAAGGAACGTGACAACTTCGTCTACATCGCCAAACTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGAGGCAATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACTGTTGAGGAGAGAAACCTTCTGTCAGTTGGGTACAAGAATGTGGTGGGTGCTCGCCGGGCTTCGTGGAGGATTCTCTCCTCAATTGAGCAGAAGGAAGAAGCTAAAGGGAATGATGTGAGTGTGAAGAGGATAAGGGAGTATAGGCAGAAGGTGGAGTCTGAGTTGTCCAATATATGCAGTGATATCATGATTGTTATTGATGAGCACCTTATTCCATCGAGCTCTGCTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAAGGAGACTACTATCGGTACCTGGCGGAATTCAAGTCTGGTGATGATAGAAAAGAGGCTGCTGATCAATCCATGAAAGCATATCAGTTGGCTTCCACTACAGCAGAGACTGAATTACCTCCCACTCATCCCATTCGATTGGGCTTGGCTTTGAACTTCTCTGTCTTCTACTATGAAATTTTGAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAACTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACCTCTGACATCCCTGAAGAAGGAGGTGAGGAAAAGGTGGAGTCTGCCCGAGCACCTGCAGGGGAAGATGCATAG 777 0.4672 MASTKERDNFVYIAKLAEQAERYEEMVEAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIREYRQKVESELSNICSDIMIVIDEHLIPSSSAGEPSVFFYKMKGDYYRYLAEFKSGDDRKEAADQSMKAYQLASTTAETELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGGEEKVESARAPAGEDA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0930 258 MobiDBLite consensus disorder prediction 237 258 - -
Lja4g0930 258 PIRSF 14-3-3 1 247 IPR000308 -
Lja4g0930 258 Coils Coil 13 46 - -
Lja4g0930 258 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 249 - -
Lja4g0930 258 SMART 1433_4 7 248 IPR023410 -
Lja4g0930 258 Gene3D - 1 249 IPR036815 -
Lja4g0930 258 MobiDBLite consensus disorder prediction 239 258 - -
Lja4g0930 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Lja4g0930 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lja4g0930 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lja4g0930 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lja4g0930 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lja4g0930 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lja4g0930 258 PANTHER 14-3-3 PROTEIN 4 249 IPR000308 -
Lja4g0930 258 Pfam 14-3-3 protein 14 235 IPR023410 -
Lja4g0930 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lja4g0930 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Lja4g0930 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0930 Lja-Chr4 7916566 7921316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0930 1 257 14-3-3 family AT2G42590 80.385 5.89e-157 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0930 K06630 - gmx:100807980 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0930 4 7916566 7921316 Lja4g0930 4 7916566 7921316 ECH