Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0924 ATGGCTGAGGCAGCTCCCAAGAACCGCCACCCAAAAACCTCCACCACCAACCCTGTTACCAACAAGAAGGAAACCACAAACATTCTCCTGGGACGGTTCGAGCTAGGGAAGCTCCTCGGCCATGGAACCTTCGCCAAAGTCCACCATGCCCGGAACATCAAAACCGGCGAAGGCGTCGCCATAAAGATCATCAACAAAGAGAAGATTCTCAAGAGTGGCCTAGTCTCACATATCAAGCGAGAGATCTCCATCCTCCGCCGTGTCCGCCACCCAAACATTGTGGAGCTCTTCGAAGTCATGGCGACCAAGACCAAGATCTACTTCGTGATGGAGTTCGTCCGCGGCGGCGAGCTCTTCAAGAAGGTTGCCAAAGGAAGACTTAAGGAAGAAGTCGCCAGAAAATACTTCCAGCAGTTAATCTGCGCGGTGGAGTTTTGCCACAGCAGAGGAGTTTTCCACCGTGATTTGAAGCCTGAGAATTTGTTGTTAGACTTGGATGGAAACCTTAAGGTTGCTGACTTTGGACTCTCTGCGGTGTCTGATCAAATCAGGCAAGATGGGTTGTTTCACACGTTTTGTGGGACACCTGCTTATGTTGCTCCTGAGGTTCTTGGTAGAAAAGGCTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGGATTGTTCTGTTTGTGTTAATGGCTGGTTATTTGCCATTTCATGATCTTAATGTCATGGCAATGTACAAGAAGATTTACAAGGGTGAATTTCGTTGTCCTAGGTGGTTTTCCCCTGAACTCACCAAGCTTCTTATTAGGCTTCTTGATACAAACCCTGAAACCAGAATTTCAATTCCTGAGATTATGATGAATCCCTGGTTCAAGGAAGATTTCAAGCAAATCAAATTCTATGTGGAGGATGATAAAGTTTGTAACATTGATCATGATGATGAGGGATTGCCATTGTTTAATTCAGAGTTCTCAGTTTCAGAATCTGACTCTGAGCTTGAGAGTATTAGAAGGAGGACGAGTCACAATAGTGCTAGTGGTTCTTCATTGCCAAGACCTGCGAGTTTGAATGCATTTGACATAATTTCATTTTCTCAAGGGTTTGATCTTTCTGGGTTGTTTGAGGCAAAGGAAGATAAGGTGAGGATTGTTACCGGCGCTTCGGTGTCGAAGATTATATCGAAACTGGAGGAAATTGCTGAGCTTGTTAGATTTACAGTGAGGAAGAAAGATTGCAGGGTGAGCTTGGAGGGTTCTAGAGAAGGGGTGAAGGGGAAATTGACAATTGCTGTGGAGGTTTTTGAGCTGACACATTCGTTGGTGGTGGCGGAGGTGAAGAGAAAAGCAGGGGATAAAACAGAGTATGAGGAGTTTCTTAACTCTGAATTGAAGCCTGCATTGCAGGGTTTGATGATGGAGGAAACTGCAACTTCTAGTTCATTTAGTTCTGCACCTGCTGAACCTGAACCTTCTCAACAACGTTCACTTTCTGATTCTGCTATTGACATACCTTCAGATGCTGAATCTTTGCAGTGA 1524 0.4508 MAEAAPKNRHPKTSTTNPVTNKKETTNILLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKSGLVSHIKREISILRRVRHPNIVELFEVMATKTKIYFVMEFVRGGELFKKVAKGRLKEEVARKYFQQLICAVEFCHSRGVFHRDLKPENLLLDLDGNLKVADFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDIWSCGIVLFVLMAGYLPFHDLNVMAMYKKIYKGEFRCPRWFSPELTKLLIRLLDTNPETRISIPEIMMNPWFKEDFKQIKFYVEDDKVCNIDHDDEGLPLFNSEFSVSESDSELESIRRRTSHNSASGSSLPRPASLNAFDIISFSQGFDLSGLFEAKEDKVRIVTGASVSKIISKLEEIAELVRFTVRKKDCRVSLEGSREGVKGKLTIAVEVFELTHSLVVAEVKRKAGDKTEYEEFLNSELKPALQGLMMEETATSSSFSSAPAEPEPSQQRSLSDSAIDIPSDAESLQ* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0924 507 Gene3D Transferase(Phosphotransferase) domain 1 22 344 - -
Lja4g0924 507 SMART serkin_6 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0924 507 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 13 472 - -
Lja4g0924 507 MobiDBLite consensus disorder prediction 469 507 - -
Lja4g0924 507 Gene3D Kinase associated domain 1, KA1 349 469 - -
Lja4g0924 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lja4g0924 507 Pfam NAF domain 349 405 IPR004041 GO:0007165
Lja4g0924 507 ProSiteProfiles NAF domain profile. 347 371 IPR018451 GO:0007165
Lja4g0924 507 CDD CIPK_C 353 464 - -
Lja4g0924 507 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Lja4g0924 507 PANTHER - 13 472 - -
Lja4g0924 507 MobiDBLite consensus disorder prediction 1 23 - -
Lja4g0924 507 MobiDBLite consensus disorder prediction 9 23 - -
Lja4g0924 507 ProSiteProfiles Protein kinase domain profile. 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0924 507 Pfam Protein kinase domain 34 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0924 507 SUPERFAMILY Protein kinase-like (PK-like) 29 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0924 Lja-Chr4 7816092 7818020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0924 28 504 CBL-interacting serine-threonine protein kinases AT4G18700 71.875 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lja4g0924 Pkinase 1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0924 - - gmx:100786078 741.11