Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0923 ATGGAAAGTAAGTGGGATCCGTTTGGAATATGGCTCAGAGTTTATGTTGGATTGATTTCTCTTTCAGGAATTCGACAGTGTTGGTCTCTGAATGATGAAGGATTGGCTTTGTTGGAATTTCGGTCAAGGATAACTTCTGATCCTTATGGTGCTCTGGCAAATTGGAATCCAAATGATTGCAACCCTTGCAAGTGGTTGGGTGTTCTTTGTGTTGATGGTAAAGTGCAAATGCTAGACTTAACTGGGCTATCATTGGAAGGAACATTGACTCCTCATCTTGGGAAACTTAATCACCTAAAATATCTTGTGTTATGCAAGAACAATTTTGTGGGCAACATTCCCAAAGAACTTGGAGACCTGGACAAGCTTGAGCTATTGGATTTAAGGGAAAATAACTTGACTGGAAGTGTCCCTGGAGAAATCAGAAGGAAAATATTGTTGAAACAATTGTTGGTTCGTAACAATAAAATTGAAGGCAGTGTTCCCCAAGAACCCGGAAATATCAGATTGCCCTCCAAATCTCTATTTGTTGACAATTATTCATCACCTCTAGCAAGTTTATTTCTCCGCAAGAATCGAAAGTTTGCTCACTATGTGTGGTATAGTGGTTTCAAGCAATGGAACAAGATAGATTCATTGGCTATTCCAATTAAAGGAGCAGTTATAAAATACCTCAACGCCTTGGCACTGCCACTGTTCAAGCGAGGACAGGCTACATATGAAGAGAATTTGTATGACAATCTGCCTAGTTCTGAAAAGTCAGAGATTGTCCCCAACATATCAAATCTAGTCAATTCTGCACGTCGTAAGTTACTCGACCAGTCCAGTAACCTTGCTGCTGCACCTTATACCGGTGGGCCTGCAGTACCGATAAGTGCTGTTCCAGTTACCCTGAGTAGTGGAGCTTTCCCAGCTGTGCCAGATGCCAGTAAGAAACAAATTGAGTCACCTGCATCACTGCCTCCACCTTCTCATTCTCCACATGATACTTTTAATCAGAGAAGTCAACAAAATTCAGCTAATGGTGCACCAGGAGAGTTATGGAAGTATATTATTATTATCTCTGGTGTGTTATTGTTAATCATTGTTATTGTGGTCATACTTTGCGTTTGGAGAAAACGAGCAAAAGTAATAAAGCCTTGGAAGACAGGAATCAGTGGGCAGCTGCAGAAAGCGTTTGTAACAGGGGTTCCCAAGTTGAACCGAGCTGAGTTGGAGACAGCCTGCGAAGATTTCAGCAATATCATTAATAGTTCTGATGAATATACCATATACAAAGGAACACTTTCCAGTGGAGTAGAGATTGCTGTTGATTCTACTACCGTTACTTCTTCACAGGATTGGTCAAAGAACATGGAGAAGGCCTATCGGAAAAAGATTGCTACTCTGTCACGTGTTAACCATAAGAACTTTATCAATCTTATTGGGTACTGTGACGAAGAAGAACCATTCACGAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCTTATTTGAGCACCTTCATGTCAAGGAAGTTGAGCATCTTGATTGGACTGCAAGAATGAGGATTATTATGGGCATGGCTTATTGTCTTCAGTACATGCATCATGATCTGAATCCACCAGTATCTCATTCAAACCTTAATGCAGTTTCTGTATTATTAACTGATGACTTTGCTGCCAAGATTTCAGAGATCAGTTTCAGCACTGATTTATTATCACCAGTCAACACACCTGAGGACGAATCAAAGAAATCCGAGCTGCCGCCCCAATCCGATCCTGATACCGATGTCTATAACTTCGGAACACTGTTACTTGAAATCATTTCTGCAAAACTACCTTACTCTGAAGAACAAGGCCACCTAGTGAAATGGGCTGCTGAGTACCTGAATGATAAGAGAAGCATCGGCTATCTAATTGATCCAACACTGCAGTCCTTCAAAGACAATGAACTTGATGTCATCTGTGAGGTGATCCAAGATTGTCTTCAACCTGACCCAAGGTTAAGACCAACAATGAAGGACATAACTTCCAAATTGAGGGAAGTGCTTTGTATATCACCTGAGCAAGCAGTTCCAAGGCTTTCTCCACTCTGGTGGGCTGAACTGGAGATCCTTTCAGGGGAAGCCACTTAA 2118 0.4145 MESKWDPFGIWLRVYVGLISLSGIRQCWSLNDEGLALLEFRSRITSDPYGALANWNPNDCNPCKWLGVLCVDGKVQMLDLTGLSLEGTLTPHLGKLNHLKYLVLCKNNFVGNIPKELGDLDKLELLDLRENNLTGSVPGEIRRKILLKQLLVRNNKIEGSVPQEPGNIRLPSKSLFVDNYSSPLASLFLRKNRKFAHYVWYSGFKQWNKIDSLAIPIKGAVIKYLNALALPLFKRGQATYEENLYDNLPSSEKSEIVPNISNLVNSARRKLLDQSSNLAAAPYTGGPAVPISAVPVTLSSGAFPAVPDASKKQIESPASLPPPSHSPHDTFNQRSQQNSANGAPGELWKYIIIISGVLLLIIVIVVILCVWRKRAKVIKPWKTGISGQLQKAFVTGVPKLNRAELETACEDFSNIINSSDEYTIYKGTLSSGVEIAVDSTTVTSSQDWSKNMEKAYRKKIATLSRVNHKNFINLIGYCDEEEPFTRMMVFEYAPNGSLFEHLHVKEVEHLDWTARMRIIMGMAYCLQYMHHDLNPPVSHSNLNAVSVLLTDDFAAKISEISFSTDLLSPVNTPEDESKKSELPPQSDPDTDVYNFGTLLLEIISAKLPYSEEQGHLVKWAAEYLNDKRSIGYLIDPTLQSFKDNELDVICEVIQDCLQPDPRLRPTMKDITSKLREVLCISPEQAVPRLSPLWWAELEILSGEAT* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0923 705 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lja4g0923 705 Pfam Protein tyrosine and serine/threonine kinase 424 674 IPR001245 GO:0004672|GO:0006468
Lja4g0923 705 Gene3D Transferase(Phosphotransferase) domain 1 493 684 - -
Lja4g0923 705 MobiDBLite consensus disorder prediction 568 589 - -
Lja4g0923 705 MobiDBLite consensus disorder prediction 313 338 - -
Lja4g0923 705 Gene3D Phosphorylase Kinase; domain 1 386 492 - -
Lja4g0923 705 PANTHER LRR RECEPTOR-LIKE KINASE 1 705 - -
Lja4g0923 705 SUPERFAMILY Protein kinase-like (PK-like) 393 674 IPR011009 -
Lja4g0923 705 ProSiteProfiles Protein kinase domain profile. 410 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0923 705 PANTHER PROTEIN MALE DISCOVERER 2 1 705 - -
Lja4g0923 705 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Lja4g0923 705 SUPERFAMILY L domain-like 28 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0923 Lja-Chr4 7808605 7814075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0923 12 674 Receptor kinase-like Gene Family AT2G01210 23.925 2.31e-42 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lja4g0923 PK_Tyr_Ser-Thr 4.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0923 - - gmx:100808098 988.023