Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0910 ATGGACAGTAAATTCAGCAACAACAGGCACCGTTATATCAATGAATTACTAGAAGAAGATGCTGAAGTAGCTCATCATCATCAAGAAAACATTGCTGATTCCCCTCCTTCTTCCACCGCGTTTAACATCGATGGCTTGGTCACTTCCTCCTCCACTTCTTCAGCTAAGAGAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACGGAAGGATCAAGGCTAAAAGCAGAAAACAACACACCACCCTCCGATTCATGGGCATGGAGAAAGTACGGCCAAAAACCCATCAAAGGTTCCCCATATCCCAGAGGGTACTACCGGTGTAGCAGTTCCAAAGGTTGTCCGGCGAGGAAACAAGTGGAGAGAAGCCGCGCGGACCCCACCATGCTCGTCGTAACCTACTCCTCCGAGCACAACCACCCGTGGCCGGTTTCCAGGAGCAACAACCAAGCTAAACCGGCAGCCAAGAAGCCCGAACCGGAACCGGAACCGGTCGAGCCGGAGGAGAAGTTGGAGGACCTGGGCGGCGAAAACGAGCTGGGGTGGCTGGGAGTAGAGATGGAGACGGCGTCATCCGCTGCCGCCATGCTCGAGAGCCCGATCATGGCGCCGGAGTTTGACGAGGCTGACGTGGCGTCGGTGTTTCTGCCGATGAGGGAGGAGGACGAGCTGCTGTTCGCTGACCTCGGGGAGCTGCCGGAGTGCTCCGCGGTGTTCCGGCATGGTTTGGTGGATGTCCGGCGGCGGCTAGCGACGCCGTGGTGCGGGACCACAACAAGTTGA 798 0.5652 MDSKFSNNRHRYINELLEEDAEVAHHHQENIADSPPSSTAFNIDGLVTSSSTSSAKRSRRAIQKRVVQIPIKETEGSRLKAENNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRADPTMLVVTYSSEHNHPWPVSRSNNQAKPAAKKPEPEPEPVEPEEKLEDLGGENELGWLGVEMETASSAAAMLESPIMAPEFDEADVASVFLPMREEDELLFADLGELPECSAVFRHGLVDVRRRLATPWCGTTTS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0910 265 Pfam WRKY DNA -binding domain 89 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g0910 265 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 262 IPR044810 GO:0003700
Lja4g0910 265 SMART WRKY_cls 87 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g0910 265 PANTHER OS01G0750100 PROTEIN 23 262 - -
Lja4g0910 265 MobiDBLite consensus disorder prediction 143 157 - -
Lja4g0910 265 ProSiteProfiles WRKY domain profile. 88 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g0910 265 SUPERFAMILY WRKY DNA-binding domain 84 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja4g0910 265 Gene3D WRKY domain 75 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja4g0910 265 MobiDBLite consensus disorder prediction 143 176 - -
Lja4g0910 265 MobiDBLite consensus disorder prediction 31 57 - -
Lja4g0910 265 MobiDBLite consensus disorder prediction 20 61 - -
Lja4g0910 265 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0910 Lja-Chr4 7632764 7634843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0910 28 246 WRKY Transcription Factor Family AT1G29280 56.962 4.70e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja4g0910 WRKY 4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0910 - - gmx:100127392 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0910 4 7632764 7634843 Lja4g0910 4 7632764 7634843 ECH