Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0906 ATGGGAAGCCAAGAGGTGCAGCTGCTGAACTTTTTGTTGAGTCCAGTTGGTAGAAGAGTTGAATGGGCTCTAAAACTGAAGGGTGTTGATTTTGAGTATGTAGAAGAAGATATCTTCAACAAGAGCAATCTCCTTCTGGAAATGAACCCAGTTCACAAGAAGGTTCCGGTTCTTGTTCATGGCCACAAACCAATCGCTGAGTCACTCATCATCCTTGAATACATTGATGAAATATGGAAGCAATATCCACTGTTACCTCTGCATCCTTATGAAAGAGCACATGCTCGCTTTTGGGCCAATTTAGCTGATGAGAAGCTAGCGCTGGGATCGTGGGTTGCATTAATGCGTAGCAGCGGCGATGAACAGGAAAAGAGGGTGAAGGAAGTGAGAGAAGTAATGGAGAAGTTGGAAGAAGAGATTCTGGGGAAGAAGTTCTTTGGAGGGGACAACATTGGGTACCTTGACCTTGTACTTGGTTGGATCCCTTGCTGGCTTCCTGTTTGGGAGGAAGTTGGGTCTATGCAAGTACTTGACACAAACAAATGTCCAGCTATCTCTGCTTGGGAGACCAATTTTCTTAGCCACCCTGTTATCAAGGACTGCTTACCTCCAAGGGACAAGCTGGTTGCTTATGCCCACCGTCGTAGGGAGCAATATTTTTCTATATAA 669 0.4514 MGSQEVQLLNFLLSPVGRRVEWALKLKGVDFEYVEEDIFNKSNLLLEMNPVHKKVPVLVHGHKPIAESLIILEYIDEIWKQYPLLPLHPYERAHARFWANLADEKLALGSWVALMRSSGDEQEKRVKEVREVMEKLEEEILGKKFFGGDNIGYLDLVLGWIPCWLPVWEEVGSMQVLDTNKCPAISAWETNFLSHPVIKDCLPPRDKLVAYAHRRREQYFSI* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0906 222 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Lja4g0906 222 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Lja4g0906 222 Gene3D Glutaredoxin 1 84 - -
Lja4g0906 222 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Lja4g0906 222 Coils Coil 119 139 - -
Lja4g0906 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 217 IPR045073 -
Lja4g0906 222 CDD GST_N_Tau 6 79 - -
Lja4g0906 222 Gene3D - 85 220 - -
Lja4g0906 222 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Lja4g0906 222 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Lja4g0906 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Lja4g0906 222 Pfam Glutathione S-transferase, C-terminal domain 118 196 IPR004046 -
Lja4g0906 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lja4g0906 222 SUPERFAMILY GST C-terminal domain-like 77 219 IPR036282 -
Lja4g0906 222 PANTHER GLUTATHIONE S-TRANSFERASE 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0906 Lja-Chr4 7576057 7577794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0906 2 218 Glutathione S-transferase Gene Family AT2G29420 45.622 1.15e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0906 K00799 - gmx:100791741 327.405