Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0904 ATGGGAAGCCAAGATGTGAAGTTATTGAGCTTTTGGCCGAGTCCATTTTCCAAAAGGGTTGAATGGGCTTTGAAGCTGAAGGGTGTTGAGTATGAGTATGTAGAAGAAGATATCTTCAACAAGAGCAGTCTCCTCCTGGAGTTGAACCCGGTTCACAAGAAGATTCCTGTTCTTGTTCATGGCCACAAAACAATCGCTGAGTCATTCATTATCATTGAATACATTGATGAGACATGGAAGCAATATCCACTGTTGCCTCATGATCCTTATGAAAGAGCTCTTGCTCGCTTTTGGGCCAATTTTACTGAACAAAAGCTTTTGGAGACAGTATTTGTTGCAATGTGTATCACCGGGGATGAACAGGAAAAGGCTCTGAATGAAGCCAGAGAAGCAATGGAGAAGATAGAAGAAGTGATTGAGGGGAAGAGATTCTTTGGAGGGGAAAATATTGGGTACCTTGACATTGCAGTTGGATGGATCTCTTACTGGATTCATATTTGGGAGGAAGTTGGGTCTATTCACATAATAGACCCATTGAAATTTCCAGCCACCACTGCATGGATGACCAACTTTCTCAGCCACCCTGTAATCAAGGACACCTTGCCCCCAAGAGACAAGATGATTGATTACTTCCATGGTCGCAAAAAGGATTTGTCTGAAACTTTTCGTGGCAGGTTTAAGGTTTAG 687 0.4265 MGSQDVKLLSFWPSPFSKRVEWALKLKGVEYEYVEEDIFNKSSLLLELNPVHKKIPVLVHGHKTIAESFIIIEYIDETWKQYPLLPHDPYERALARFWANFTEQKLLETVFVAMCITGDEQEKALNEAREAMEKIEEVIEGKRFFGGENIGYLDIAVGWISYWIHIWEEVGSIHIIDPLKFPATTAWMTNFLSHPVIKDTLPPRDKMIDYFHGRKKDLSETFRGRFKV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0904 228 Gene3D - 85 221 - -
Lja4g0904 228 Coils Coil 118 138 - -
Lja4g0904 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Lja4g0904 228 Gene3D Glutaredoxin 1 84 - -
Lja4g0904 228 PANTHER GLUTATHIONE S-TRANSFERASE 1 218 - -
Lja4g0904 228 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Lja4g0904 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lja4g0904 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
Lja4g0904 228 CDD GST_N_Tau 6 79 - -
Lja4g0904 228 SFLD Main (cytGST) 2 218 - -
Lja4g0904 228 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Lja4g0904 228 Pfam Glutathione S-transferase, C-terminal domain 119 195 IPR004046 -
Lja4g0904 228 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Lja4g0904 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Lja4g0904 228 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0904 Lja-Chr4 7567831 7568883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0904 2 219 Glutathione S-transferase Gene Family AT2G29420 45.413 2.35e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0904 K00799 - gmx:547583 375.555