Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0844 ATGGAAGAGGTGGCAAAGCTGTTAGCAGTTTTGGCACTCTTTGTCCTTTCTCTGCATTTCATAACCAAATTTCTCAAACTCAGAAACCGTCCGAGCCTGCGTCATCTTCCTCCGGGAGCCTCAGGATGGCCTGTTGTTGGAGAAACCTTTGAGTTTCGGAAAAGGAGTCTCGAGGGCAGCCCAACAAGGTTCATACAAGAGAGGATGGACAAGTATGACTCGAGGGTGTTCAAGACATCATTGTTTGGAAGTCTTCTTGCTGTGTTGTGTGGACCAGCTGGGCACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTCCAAGTTTGGTGGCCCGGGTCAGTGAGGAAGCTGATGAGCCAGTCTCTGGTTAGTAGGGTTGGTGATGAAGCAAAGATGACGCGGAAGTTGCTCTTGAGCTTTCTTAATGCAGAAACACTCAGAAACTTTGTGCCTAAAATGGACAGCATTGCTCAGCGCCATATAAAGACACACTGGGAGGGGAAGGTGCAGGTGCTTGTCTATCCCATAATACAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACAGCCAGGTACCAAATCTTTCTTCACTGTTTGATGTATTTCTGAAAGGGATCATTGCATTCCCCATCAACTTGCCTGGAGCAAGGTTTCATCGGGCAATGAAAGCTGCGGATGCAATACGGAAAGAAATTAAAATGATTCTTAAGAAAAGGAAAGTGAACTTGGAAGAAAAGAGGGCGTCGCCTACCCAAGACCTTTTATCACATTTGCTTGTTACGTCTGATGCCAATGGAAGGTTTTTGTCGGACATGGAGATTATTGATAACATATTACTACTGCTTTTTGCTGGTCATGATACTTCTAGATCAGTGATATCATCAGTCATGAACTATCTCGGACAGTTACCTCAAGTTTATGAACTTGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAGGAGGAAGGTGAGTTGTTGCGATGGGAGGATGTTCAGAAAATGAAGTATACTTGGAATGTTGTATCTGAAGTTATGAGGCTGTCGCCACCAGTCAGAGGCGCTTACAGAGAAGCGATAAAGGATTTCACCTATGCTGATTATAACATTCCTAAAGGCTGGAAGTTGCTTTGGAACACTGGTTCATCACACAAAGATCCAACACTTTTCTCGAATCCTGAAAATTTTGATCCTTCGAGGTTTGAAGGAGAAGGGCCTGTACCCTTTTCATACGTTCCATTTGGAGGAGGACCTCGAATGTGTTTGGGGCAAGAGTTTGCTCGGTTAGAGATACTTGTGTTTATGCATAATATAGTCAAGCGTTTCAAGTGGAATTTAGTGCTTCATGATGAGAAGTTCAAGTATGATCCCTTGCTAGAACCAGAAAAAGGACTCCCGATTCAACTTCAACCTTCACCTCTCTTGCCAAATACCTTCTCCAGACACATAATACATTGA 1473 0.4325 MEEVAKLLAVLALFVLSLHFITKFLKLRNRPSLRHLPPGASGWPVVGETFEFRKRSLEGSPTRFIQERMDKYDSRVFKTSLFGSLLAVLCGPAGHKFLFSNENKNVQVWWPGSVRKLMSQSLVSRVGDEAKMTRKLLLSFLNAETLRNFVPKMDSIAQRHIKTHWEGKVQVLVYPIIQLYTFELACCLFLSIEDSQVPNLSSLFDVFLKGIIAFPINLPGARFHRAMKAADAIRKEIKMILKKRKVNLEEKRASPTQDLLSHLLVTSDANGRFLSDMEIIDNILLLLFAGHDTSRSVISSVMNYLGQLPQVYELVLKEQLEISQGKEEGELLRWEDVQKMKYTWNVVSEVMRLSPPVRGAYREAIKDFTYADYNIPKGWKLLWNTGSSHKDPTLFSNPENFDPSRFEGEGPVPFSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWNLVLHDEKFKYDPLLEPEKGLPIQLQPSPLLPNTFSRHIIH* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0844 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Lja4g0844 490 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 SUPERFAMILY Cytochrome P450 32 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 Pfam Cytochrome P450 37 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 Gene3D Cytochrome P450 28 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0844 490 PANTHER CYTOCHROME P450 26 19 467 - -
Lja4g0844 490 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 19 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0844 Lja-Chr4 7046252 7049536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0844 32 381 Cytochrome P450 AT5G36110 45.480 3.26e-101 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0844 - - gmx:100778750 753.436