Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0842 ATGGAGGTGGTCAAGCTGTTAGTAGTTTTGGCACTCTTTGTCCTTTCTCTGCATTTCATCACCAAAATAGTCAAACTCAGAAAGAATCCAAAGCTGAACCTTCCTCCAGGAACCTCAGGATGGCCTATTGTTGGAGAAACCTTTGAGTTTCTCAGAAACAGTCCTGAGGGAACCCCGTCAAGGTTCGTAGAGGAGAGAATGAACAAATATGACTCAAGGGTGTTCAAGACATCATTGCTTGGATATCATATGGCTGTGTTTTGTGGACCAGCTGGGAACAAGTTCTTGTTCAGCAATGAGAACAAGAATGTCCAAGTGTGGTGGCCCAGCTCAGTGAGGAAGCTGATAAGGCAGTCTCTAGTTAATAAGGTTGGTGATGAAGCAAAGTTGACAAAGAGGTTGCTCTTAAGCTTTCTCAATGCAGATGCACTTAGAAATTTCTTGCCAAAAATGGATAGCATTGCTCAGCACCATATTAGGACGCACTGGGAGGGGAAGATGCAAGTGCATGTCTATACCATAATACAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCTTTGGAAACTCTAGCCAGGTAGCAAATCTTTCTTCACTGTTTGATGTATTTCTGAAAGGGATCTTTGCATTATCCATTAACTTTCCTGGAACAAGGTTTCATCGGGCAATGAAAGCTGCGGATGCAATAAAAAAAGAAATCAAAATGCTTCTTAAGAAAAAGAAAGTGGATTTGGAAGAAAATAGGATTTCGCCTACCAAGGACCTTTTATCACATTTGCTTGTTACATCTGATACCAATGGAAGGTTTTTGACCGAAACGGAGATTAGTGATAACATATTACTATTGCTTTTTGCTGGTCATGATACTTCTAGATCAGTGTTATCATCAGTCATGAAGTATCTCGGACAGTTACCTGAAGTTTATGAACGTGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGAAGCTGAATTGCTGCATTGGGAGGATGTTCAGAAAATGAAGTACACTTGGAATGTTGTATCTGAAGTTATGAGGCTGTCGCCACCCGTGAGAGGTGCTTATAGAGAAGCGATAAAGGATTTCACCTATGCTGATTATAACATCTCTAAAGGGTGGAAGTTGCAATGGAGCACTAATGCATCACACAAGGATCCAACACTTTTCTCGAATCCTGGAAATTTTGATCCTTCGAGATTTGAAGGAGAAGGGCCTACACCCTTTTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGGCAAGAGTTTGCTAGGCTAGAGATACTTGTGTTTATGCATAACATAGTCAAAAGTTTCAAGTGGGATTTAGTGATTCCTGATGAGAAGTTCAAGTATGATCCCATGCTAGAACCAGAAAAAGGACTCCCAATTCAACTTCAACCTTCCCATTTCTAG 1437 0.4071 MEVVKLLVVLALFVLSLHFITKIVKLRKNPKLNLPPGTSGWPIVGETFEFLRNSPEGTPSRFVEERMNKYDSRVFKTSLLGYHMAVFCGPAGNKFLFSNENKNVQVWWPSSVRKLIRQSLVNKVGDEAKLTKRLLLSFLNADALRNFLPKMDSIAQHHIRTHWEGKMQVHVYTIIQLYTFELACCLFLSFGNSSQVANLSSLFDVFLKGIFALSINFPGTRFHRAMKAADAIKKEIKMLLKKKKVDLEENRISPTKDLLSHLLVTSDTNGRFLTETEISDNILLLLFAGHDTSRSVLSSVMKYLGQLPEVYERVLKEQLEISQGKEEAELLHWEDVQKMKYTWNVVSEVMRLSPPVRGAYREAIKDFTYADYNISKGWKLQWSTNASHKDPTLFSNPGNFDPSRFEGEGPTPFSYVPFGGGPRMCLGQEFARLEILVFMHNIVKSFKWDLVIPDEKFKYDPMLEPEKGLPIQLQPSHF* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0842 478 Pfam Cytochrome P450 35 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 SUPERFAMILY Cytochrome P450 31 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0842 478 PANTHER CYTOCHROME P450 26 16 466 - -
Lja4g0842 478 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 16 466 - -
Lja4g0842 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0842 Lja-Chr4 7031477 7034374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0842 33 385 Cytochrome P450 AT5G36110 41.573 2.76e-94 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0842 - - gmx:100778750 746.117